Gene SO_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0228 
SymbolfusA-1 
ID1168111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp241889 
End bp243985 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content47% 
IMG OID637342235 
Productelongation factor G 
Protein accessionNP_715868 
Protein GI24371826 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCGTA CAACCCCAAT TGAGCGTTAT CGTAATATCG GTATTTGTGC TCATGTGGAC 
GCAGGTAAAA CCACCACAAC AGAACGTGTT CTGTTCTATA CCGGTTTGTC TCATAAAATC
GGTGAGGTGC ATGACGGCGC CGCGACCACT GACTGGATGG TGCAAGAGCA AGAGCGTGGT
ATTACTATCA CCTCGGCTGC TGTAACCACT TTCTGGCGTG GTATGGATGC TCAATTCACT
GAACACCGCA TCAATATCAT CGATACCCCT GGTCACGTTG ACTTCACTAT TGAGGTTGAA
CGTTCTTTGC GCGTTCTTGA CGGCGCTGTT GTGGTTTTTT GTGGCGCTTC AGGTGTTGAG
CCTCAATCAG AAACCGTATG GCGTCAAGCT GATAAATACC GCGTTCCACG CATCGTATTT
GTCAACAAAA TGGACCGTGC AGGCGCGGAC TTTGAACGTG TAGTGAAGCA AATCAGAACT
CGCCTTGGGG CAACTTGTGT TCCGATCCAA TTAAACATCG GCGCAGAAGA AAACTTCACT
GGCGTGATCG ACTTAATCAA GATGAAAGCC ATTAACTGGA ACGAAGCGGA CCAGGGTATG
ACGTTCTCTT ATGAAGCGAT CCCTGCACAC TTAACCGCTA AAGCGGAAGA AATGCATGAG
TTTCTGGTTG AGGCAGCCGC CGAGGCCTCT GATGAACTGA TGGATAAGTA TCTTGAAGAA
GGCACGCTAT CAGAAGAAGA GATCAAAAAG GCACTGCGTC AGCGTACTAT TAATAATGAA
ATCGTTTTAG CGACCTGTGG TTCTGCATTT AAGAACAAGG GCGTTCAGGC GGTTCTTGAT
GCGGTAGTAG AATTCTTGCC TGCACCTGTT GATGTGCCTC CTATTAAGGG CATTGACGAC
AATGAGCAAG AAGTTGAGCG CCCATCAGAT GACAATGCCC CCTTTGCGGC GTTGGCATTT
AAGATTGCTA CAGACCCGTT CGTGGGTACT TTGACCTTTA TTCGTGTTTA CTCAGGCGTA
CTCGAATCAG GCTCTGGCGT TTATAACTCT GTCAAACAGA AACGTGAACG TATTGGCCGT
ATCGTGCAAA TGCACGCTAA CGACCGTACA GAATTGAAAG AAGTGCGTGC GGGTGATATT
GCTGCGGCTA TTGGACTAAA AGAAGTGACC ACGGGTGACA CACTTTGTGA TAACGATCAC
AAGGTGATCT TGGAACGCAT GGAGTTCCCA GAGCCAGTAA TTACCATTGC CGTTGAGCCT
AAGTCGAAAG CTGACCAAGA TAAAATGGGC ATCGCACTGC AAAAGCTTGC AGCTGAAGAT
CCTTCATTCC GGGTTGAGAC AGACGAAGAA TCATCACAAA CACTGATTTC TGGAATGGGT
GAGTTACACT TAGACATCAT CGTGGACCGT ATGCGTCGCG AATTCGGTGT CGAGTGCAAC
GTAGGTAAGC CACAAGTGGC CTACCGTGAG ACCATTCGGG GATCAGTTGA GGCTGAAGGT
AAATTTGTGC GCCAATCAGG TGGCCGTGGA CAATTCGGTC ATGTTTGGTT AAAACTAGAG
CCTAACGAAG AAGGCGCTGG TTACGAATTT ATCAATGCAA TCGTTGGGGG TGTGGTTCCA
CGTGAATTCA TTCCTGCGGT TGATAAAGGT ATCCAAGAAC AGATGAAGAA TGGCGTTCTC
GCCGGCTTCC CTGTGTTGGA CGTGAAGGTC ACTCTATTCG ATGGTTCATA TCATGATGTG
GACTCGAATG AAATGGCGTT CAAAATTGCG GGTTCTATGG GCTTCAAAAA GGGTGCGCTT
GAAGCGAAAC CTGTGTTGCT CGAACCTTGC ATGAAAGTAG AAGTAACTAC TCCAGAAAAC
TACATGGGTG ATGTTGTTGG TGATTTAAAC CGTCGCCGTG GTTTGATTGA AGGTATGGAT
GATGGCTTTG GTGGCATCAA AATAATCCAT GCAGTAGTGC CTCTTTCTGA AATGTTTGGT
TATGCAACTG ATTTGCGTTC TGCAACTCAG GGTCGTGCTT CTTACTCTAT GGAGTTCTTG
AAGTACACTG ATGCACCGCA AAACATTGCG AAAGCGATTA TTGAATCTCG TAGCTAA
 
Protein sequence
MARTTPIERY RNIGICAHVD AGKTTTTERV LFYTGLSHKI GEVHDGAATT DWMVQEQERG 
ITITSAAVTT FWRGMDAQFT EHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGASGVE
PQSETVWRQA DKYRVPRIVF VNKMDRAGAD FERVVKQIRT RLGATCVPIQ LNIGAEENFT
GVIDLIKMKA INWNEADQGM TFSYEAIPAH LTAKAEEMHE FLVEAAAEAS DELMDKYLEE
GTLSEEEIKK ALRQRTINNE IVLATCGSAF KNKGVQAVLD AVVEFLPAPV DVPPIKGIDD
NEQEVERPSD DNAPFAALAF KIATDPFVGT LTFIRVYSGV LESGSGVYNS VKQKRERIGR
IVQMHANDRT ELKEVRAGDI AAAIGLKEVT TGDTLCDNDH KVILERMEFP EPVITIAVEP
KSKADQDKMG IALQKLAAED PSFRVETDEE SSQTLISGMG ELHLDIIVDR MRREFGVECN
VGKPQVAYRE TIRGSVEAEG KFVRQSGGRG QFGHVWLKLE PNEEGAGYEF INAIVGGVVP
REFIPAVDKG IQEQMKNGVL AGFPVLDVKV TLFDGSYHDV DSNEMAFKIA GSMGFKKGAL
EAKPVLLEPC MKVEVTTPEN YMGDVVGDLN RRRGLIEGMD DGFGGIKIIH AVVPLSEMFG
YATDLRSATQ GRASYSMEFL KYTDAPQNIA KAIIESRS