Gene SO_0222 details

Gene Information

• Locus tag: SO_0222
• Symbol: rplJ
• ID: 1168105
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 231201
• End bp: 231701
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637342229
• Product: 50S ribosomal protein L10
• Protein accession: NP_715862
• Protein GI: 24371820
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0244] Ribosomal protein L10

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAA GACTCGAAGA CAAAAAAGCG ATTGTTGCTG AAGTCAACGA AGCTGCCAAA 
GGTGCGCTAT CTGCAGTTGC CGCTGATTCT CGCGGTGTAA CTGTAGGTGC TATGACCGGT 
CTGCGTAAAA AAGCTCGCGA AGCTGGTGTT TATGTACGTG TAGTACGTAA CACTCTGGCT 
CGTCGTGCTG TTGAAGGTAC TGCATTTGAG TGCCTAGCAG AAACGTTCAC TGGCCCAACT 
TTGATTGCTT TCTCTAACGA GCACCCAGGT GCTGCAGCTC GTCTGTTAAA AGACTTTGCT 
AAAGAGCAAG CTAACTTCGA AGTTAAAGGC GCAGCCTTTG AAGGGAATTT CATCCCTGCA 
GCTGACATTG ATCGTTTGGC GAAACTGCCA ACATACGAAG AAGCACTAGC ACAGTTAATG 
ATGACTATGA AAGAAGCATC TGCTGGCAAG TTCGTTCGTA CACTGGCCGC CCTGCGCGAT 
CAAAAACAAG AAGCCGCTTA A 

 

Protein sequence

MALRLEDKKA IVAEVNEAAK GALSAVAADS RGVTVGAMTG LRKKAREAGV YVRVVRNTLA 
RRAVEGTAFE CLAETFTGPT LIAFSNEHPG AAARLLKDFA KEQANFEVKG AAFEGNFIPA 
ADIDRLAKLP TYEEALAQLM MTMKEASAGK FVRTLAALRD QKQEAA