| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0221 |
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| Symbol | rplA |
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| ID | 1168104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 230234 |
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| End bp | 230935 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637342228 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | NP_715861 |
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| Protein GI | 24371819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC TAACTAAACG CATGCGCGTA ATCCGCGAGA AAGTTGACGG TACTAAATTA
TACGAAATCA ACGATGCTGT TGCTCTGTTA AAAGAATTAG CAACTGCTAA GTTCGTTGAA
AGTGTTGACG TTGCTGTTAA CCTGGGTATC GACCCACGTA AATCTGACCA AAACGTTCGT
GGTGCAACTG TGTTACCACA CGGCACTGGT CGTGACGTTC GCGTTGCAGT ATTTACACAA
GGTGCAAATG CTGAAGCTGC TAAAGCTGCT GGTGCTGAAC TTGTTGGTAT GGATGATCTG
GCTGAGAAAA TCAAAGCCGG TGAAATGAAC TTTGACGTGG TTATCGCATC TCCAGACGCA
ATGCGCGTTG TTGGTATGTT AGGTCAAATC TTAGGCCCAC GTGGTTTAAT GCCTAACCCA
AAAACTGGCA CAGTAACGCC AAACGTTGCT GAAGCAGTTA AGAATGCTAA AGCTGGTCAA
GTTCGTTACC GCAACGACAA GAACGGTATT ATCCACACTA CTATCGGTAA AGTGGATTTC
ACACCAGTTC AATTGAAAGA AAACTTGGAA GCGTTAATCT CTGCACTGAA AAAGGCTAAG
CCAGCAGTTG CAAAAGGTGT ATACGTGAAA AAAGTAAGCA TCTCTACCAC TATGGGTGCA
GGTGTTGCTG TTGACCAAGC TTCTCTCGAA ACAGCTAACT AA
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| Protein sequence | MAKLTKRMRV IREKVDGTKL YEINDAVALL KELATAKFVE SVDVAVNLGI DPRKSDQNVR
GATVLPHGTG RDVRVAVFTQ GANAEAAKAA GAELVGMDDL AEKIKAGEMN FDVVIASPDA
MRVVGMLGQI LGPRGLMPNP KTGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
TPVQLKENLE ALISALKKAK PAVAKGVYVK KVSISTTMGA GVAVDQASLE TAN
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