Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0194 |
Symbol | |
ID | 1168080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 203016 |
End bp | 204878 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342196 |
Product | acyltransferase family protein |
Protein accession | NP_715836 |
Protein GI | 24371794 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTAA CAAAACGTTT TTTACCGTAT TTTGCGACTC AATGCCTTGG CGCACTTAAT GACAATATCT ACAAAAATGT GCTGTTGTTA TTGGTGACCT TTAGCCAAGT CAATAACCTC CCTATTAGTG TCGATATGTT TGTCAATTTG GCTGCTGGGG TGTTTATTTT GCCGTTTTTC CTGTTCTCGG CCCATGCGGG TGTGGTGGCC GACAATATGG ATAAAGCGAA ACTTATCCGT CGATTAAAAT TGCTCGAAGT CATCATTATG TTCAGCGCCG CACTTGCCAT TGTGAGCGAG AATTACATGA TGATGTTATT GCTGCTGTTT TTAACTGGCA GTCAGTCTGC CTATTTTGGC CCAGTCAAAT ATTCACTGTT ACCTCAAGCT TTAAAGGAAG ATGAGTTAGT CACAGGTAAT GCGTGGGTTG AGATGGGGAC ATTTCTCTCA ATCTTGATTG GTACCTTGGG TGCGGGGATT TTAGTCTCTG ACAACAATGC GACCCTTTGG TCGGCACTCA CGGTGGCAGC TCTCGCTTTA GCAGGTTATT TATCTAGCCG AGCTATTCCC GCTTTACCGC CGCAGGGCGC AGTGCAAAAG ATTCCTTTTC GGCCATTATC GGGTACGTGG CGCTCGATTC AAAAAGCGCG CCAAACGCCT TCAATTTGGA TGGCGATCCT CGCCATTAGT TGGTTCTGGT TTTTGGGCGC GACGTATCTG ACCCAATTCC CTAACTTTGC CAAGTTGCAT CTGCATTCTG GCGCGACTGT AGTGTCGCTG TTGCTGGGGA TGTTCTCTAT CGGGATTGCA GTAGGTTCGT TTGTCTGTGA GCGTTTTTCC TTTGGACATG TGGAATTAGG TTTGCTGCCT TTTGGGGTGC TCGGGTTAAC CGTGTTTGGA GTGGATCTGC TGTGGGCGAT TCCGCCAGCA CCTGCGGATG CAAGTTTTGT CTATGGCTTA CAAACTTTTA TTGCCCAATC ACAACATTAT CGTGTGATGC TGGATTTCTT TATGATTGGC GTCAGTGGCG GTTTGTTTAT TGTGCCTCTG TACGCCTTTA TTCAAACCCG CTCCGCGAAG GGGGAATGTG CGCAGGCGAT TGCCGCGAAT AACATTATGA ACTCGCTGTT TATGGTGGCT TCGGCGTTGT TGTCTATGTT GCTGCTTGGG GTGGCTGGCT GGAGTATTCC GCAGTTGTTC TTACTGCTAG CGGTGATGAA TTTCGTTGTT GCTCTCTATG TGTATTCACA AGTGCCTGAG TTTACGCAGC GATTTATCAG TTATTTACTG AGCCATGTGC TGTATCGTGT GACAGTGACT GGGCGGGATA AGATCCCTAA AGAAGGTGCA GGCATTATCG TCAGTAACCA TGTGAGTTAT GTCGATGCGC TGATCATTAT GGGAGCTTCA ACTCGACCGA TTCGATTTGT GATGGATAAA TCGATCAGTG AAATCCCAGT GCTAAAGTAT TTATTCCGCC ATGCGGGAGT GATCCCAATT TGCTCTCCTC GGCAGAGTGA AGCAACTTAC AATCAGGCTT TTGAATCGAT TCATGAGGCG TTAGCGAATG GTGAGTTAGT GTGTATCTTC CCCGAAGGCC GTTTAACGCC GGATGGCGAA TTAGGCGAGT TCCGCCCCGG AATCGATAAA ATACTCGCTC GCGATCCGGT GCCCGTTGTC CCAATGGCGC TTAATGGCTT GTGGGGCTCT TACTTCAGTC ATAAAGACGG CCATGCATTA ACGACTATGC CAAAACGCTT TTGGTCTAAA GTGTCGGTGA ATTTAACGGA TGTGGTTGAT GGGCAAGATG CCAATCGGTA CGCTTTAAGA GATGCCGTCG CCCATCTGCT CCACAAATAT TAA
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Protein sequence | MLLTKRFLPY FATQCLGALN DNIYKNVLLL LVTFSQVNNL PISVDMFVNL AAGVFILPFF LFSAHAGVVA DNMDKAKLIR RLKLLEVIIM FSAALAIVSE NYMMMLLLLF LTGSQSAYFG PVKYSLLPQA LKEDELVTGN AWVEMGTFLS ILIGTLGAGI LVSDNNATLW SALTVAALAL AGYLSSRAIP ALPPQGAVQK IPFRPLSGTW RSIQKARQTP SIWMAILAIS WFWFLGATYL TQFPNFAKLH LHSGATVVSL LLGMFSIGIA VGSFVCERFS FGHVELGLLP FGVLGLTVFG VDLLWAIPPA PADASFVYGL QTFIAQSQHY RVMLDFFMIG VSGGLFIVPL YAFIQTRSAK GECAQAIAAN NIMNSLFMVA SALLSMLLLG VAGWSIPQLF LLLAVMNFVV ALYVYSQVPE FTQRFISYLL SHVLYRVTVT GRDKIPKEGA GIIVSNHVSY VDALIIMGAS TRPIRFVMDK SISEIPVLKY LFRHAGVIPI CSPRQSEATY NQAFESIHEA LANGELVCIF PEGRLTPDGE LGEFRPGIDK ILARDPVPVV PMALNGLWGS YFSHKDGHAL TTMPKRFWSK VSVNLTDVVD GQDANRYALR DAVAHLLHKY
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