Gene SO_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0193 
Symbol 
ID1168079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp202414 
End bp203025 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content44% 
IMG OID637342195 
ProductTetR family transcriptional regulator 
Protein accessionNP_715835 
Protein GI24371793 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGAC GCAAAGAGCA TAGTCACGAT GAAATTCGTG TTATGGCAAT TGAAGCAGCA 
ATAGCACTGT TACAACAGCA GGGAGTGCAA GGGCTGAGTT TACGTAAGAT TGCCAGTGAG 
ATTGGTTATG TACCCAGTAC GTTGATCAAT ATCTTTGGCA GTTATAACTA TTTATTACTG 
GCAGTTTCAG AGGCGACATT ACAGTTGTTA ATGAGCCATC TATCCGCAGT GAGCGAAAAC 
GACAGTCTTC GTCATATCAT CGTCATGGCG CAAAAATACA GTGAGTTTGC CCATAGTCAG 
CGCCAATGTT TTAAGCTGGT ATTCGAGCTA CAATTACTCG AGTCTGAACA TTTACCCGCA 
TCCCAAGGCC AACTTATTGC AAACTTATTT AGGTTAATTG AAAACGAACT AGCCCTGCTA 
TTCCCTAACG AGACAATTGA GCAGCAACTG CAAATGAGTC GCGTGCTCTG GGGCGGGATC 
CACGGACTGA CGGCATTATC GTTGGATAAT AAATTATTTG CCGATACAGT ATCTTTACCC 
GCTTTGCTAG AAAGTCATGT GACAGGGTAT TTACAGGGAA TGGGTTACCA GAGGGAAGAA 
GCATGCTGCT AA
 
Protein sequence
MARRKEHSHD EIRVMAIEAA IALLQQQGVQ GLSLRKIASE IGYVPSTLIN IFGSYNYLLL 
AVSEATLQLL MSHLSAVSEN DSLRHIIVMA QKYSEFAHSQ RQCFKLVFEL QLLESEHLPA 
SQGQLIANLF RLIENELALL FPNETIEQQL QMSRVLWGGI HGLTALSLDN KLFADTVSLP 
ALLESHVTGY LQGMGYQREE ACC