Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0191 |
Symbol | cysQ-1 |
ID | 1168077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 200915 |
End bp | 201727 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342193 |
Product | cysQ protein |
Protein accession | NP_715833 |
Protein GI | 24371791 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCTG AAGAGTTAAT CGACGAGGTG ATTGCGATAG CAACCGATGC GGGTCGCACT ATTCGTGATA TTTACCTTAA GGGTAATTTT GAGCGAGAAA CTAAGTCTGA TAATACCCCT GTCACCTCGG CAGATTTAGC GGCGAATAAA CTGATTTGTG AACGCTTAGC AGCCTTGACG CCCGATATCC CTATTTTGTC AGAAGAGGCT GCCGACATTC CCTTAAGTGT GCGTGAAGTG TGGAAATGCT ATTGGCTAGT CGATCCACTC GATGGGACGG GGGAGTTTAT TGCTGGCAGT GGCGATTTTT CAGTGATCGT TGCGCTGGTG GAGCATAACC GTCCTGTAAT GGGTGTAGTC TATGTGCCGA TGACGCAGGT GTGTTATTAC GCCATTGCGG GCTTAGGGGC CTATAAACGT ACTGATAAAC AGGAAGTGAG GATCAGTAGC CGACAAATTC AGCACCGCGA GCAAGTGTCC TTAAGGTTAG CGGTGAGTCG CCGTCAAGAT CCCCAATCCG TGTTGACCCT ATTCAACCAG CCTAAACATT GCGAATTAGT GGTGATGGGT GGTGCGGCCT TAAAGAGTTG TTTGGTTGCT GAGGGGCGTG CCGATTGCTA TGTGCGAGTG GGACCGACGG GTGAGTGGGA CACGGGCGCT GCGCAGATCA TTATCGAGGA AGCGGGCGGG CAGATGATGG ATACTGAGCT GCAACCTTTA ACTTACAATG AACGCGAGAC GCTTGAAAAT CCTAATTTTA TTGTAGTTGG CGCGCCCAAT TTAGCGTGGG ATAAAATTTT AATTGGTGAA TAA
|
Protein sequence | MKPEELIDEV IAIATDAGRT IRDIYLKGNF ERETKSDNTP VTSADLAANK LICERLAALT PDIPILSEEA ADIPLSVREV WKCYWLVDPL DGTGEFIAGS GDFSVIVALV EHNRPVMGVV YVPMTQVCYY AIAGLGAYKR TDKQEVRISS RQIQHREQVS LRLAVSRRQD PQSVLTLFNQ PKHCELVVMG GAALKSCLVA EGRADCYVRV GPTGEWDTGA AQIIIEEAGG QMMDTELQPL TYNERETLEN PNFIVVGAPN LAWDKILIGE
|
| |