Gene SO_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0188 
Symbol 
ID1168074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp191382 
End bp192473 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID637342190 
Producthypothetical protein 
Protein accessionNP_715830 
Protein GI24371788 
COG category 
COG ID 
TIGRFAM ID[TIGR03032] conserved hypothetical protein TIGR03032 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAC AAACCGTTTT ACCAGAACAG GATCATGATA AATCAGCCAT TGATGAGTTG 
GACTTTTCTT GTCATTCAAG CGGTAACTTT CCCGGCATAT TGGCTGGATT GAAGCTTTCA
TTAGTCGTCA CGAGTTATCA GGCGCACAGA TTGTTTTTTG TACGTTCAAA TGGTATCCAA
ATTGATGTTA ACTTCAAAAA TTTTGTGCGC CCCATGGGCA TCTCTGTGAC GCCGCAACAA
ATCACTCTGG GTACCTTGAA TCAGGTGTGG CGATTTCGAC GTAGCGATGA TGCATTGGCG
CTGCTTGATG ACCCGCATGC AGATGCTTGT TATGTGGCAA GTGCCTGTCA TACCACTGGC
TTAATTAATA TTCATGATAT CGCCTACGGC AATAAAGGTT TGTGGGTGAC TAATAGTGCT
TTTTCTTGCC TCGCCACTCT TGAACCGGAC TATAGCTTTG TGCCGCGCTG GAAGCCGGAT
TTTATTTCTG CGCTTGCACC TGAGGATCGT TGCCATTTGA ATGGGATGGC ATTGTTGGAT
GGCGAGCCAG CCTATGTCAC TACATTTAAT CAGTCCGACA CAGCAAGATC CTGGCGCGAT
GGTGCCAAGG ATCAGGGAAC ACTGATTAAC ATCAAAACCG GTGAGCAGAT ATTTTCCAAT
TTGACGATGC CGCATTCACC GCGCTGTTAC AACGGATATG TATATTTTTG CGAGTCAGGT
CATGGCTTGG TACGCCGCTA TGATCCGCGT ACGAATGAAG TGGTCGATGT GGTCAAGCTA
GCGGGTTTTA CCCGAGGAAT GGATTTTTTT GGCCCCTTGA TGTTTGTGGG GCTGTCAAAA
ACTCGCTTTA GCTCAGTTGC TGAACCAGCG CCAATTGCGC AACAACTTGA GGAGTCTCAA
AGCGGTATCT GGTGTATTAA TTTGACCGAT CACTCAGTTG TTGGATTTGT GCGCTTTGAA
GGCAACATAG ATCAAATTTA CGATGTTGCC GTGTTATCTG GTGTCATGTA CCCGGAGCTG
CTATTGCCGG ATGATGAACT GTCTATGTCT GTGTTTAATT TTCCGCCTCT GAGTTATGCG
TCGGAAAATT AA
 
Protein sequence
MDQQTVLPEQ DHDKSAIDEL DFSCHSSGNF PGILAGLKLS LVVTSYQAHR LFFVRSNGIQ 
IDVNFKNFVR PMGISVTPQQ ITLGTLNQVW RFRRSDDALA LLDDPHADAC YVASACHTTG
LINIHDIAYG NKGLWVTNSA FSCLATLEPD YSFVPRWKPD FISALAPEDR CHLNGMALLD
GEPAYVTTFN QSDTARSWRD GAKDQGTLIN IKTGEQIFSN LTMPHSPRCY NGYVYFCESG
HGLVRRYDPR TNEVVDVVKL AGFTRGMDFF GPLMFVGLSK TRFSSVAEPA PIAQQLEESQ
SGIWCINLTD HSVVGFVRFE GNIDQIYDVA VLSGVMYPEL LLPDDELSMS VFNFPPLSYA
SEN