| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0187 |
|---|
| Symbol | |
|---|
| ID | 1168073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 190156 |
|---|
| End bp | 191379 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637342189 |
|---|
| Product | serine protease |
|---|
| Protein accession | NP_715829 |
|---|
| Protein GI | 24371787 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATG TAATAAAAGT TCTGCTCCTG TTTTTTTGTT TTTTTCCAGT AGTGGCTTTG
GCAAAAGTAG AATCTATTTC TTTCATGAAT TTTTCGGTAT CAGTAGATTT TCATTTACAA
AAAAATGGAC TGTACAAACT GCGCGGTTCA TCGTTTGAAG TGCAGTTTGC GCCGCGTCTT
ATAGTAAAGA CTGCTCGCGC CGTCACAGCT GCTGAATTGG CAGTATTAAT ACCTAATGCA
ACAGAAATTA CGGATGTATT TTTGTTAACA GAGACACGCT ACTTTTTGAT TGCTTTTGCC
CGAGAAGAAG AGTCTTTTGC CGCATTAAGA AAATTACAGG CCTTGCCTTC TATTCTTTTG
GTACAACCGG ACTTACAACA GAAAAGGGCA ACCGCTGAGT TTGTTGATAC TGAGTTTGCT
GGTGCACCCA TTCTCGCCGT GGGATTACCC GTTTATCTTG AGCGTGCTCA ACAGGAATCT
GTATGGCCGA GTAATGGCGG TGCTGGGGTA ACGGTAGCAG TAATTGATGA TGGTTTTATG
TTGCGACACT CGGAGTTTGC ACATCTCAAT ACCAGCATTT ACTACGATTT TGCCGCACGA
GAATTAATGC AAATAAGTGA TGAGAAAAAA AAACAGGTAT CAGCAAAACA CGGCACTAAA
GTATTGGGCA TTTTATTTGG CGAACATAAT CAGCATGAAC CCGAAGGCTT GGTGCCCAAC
GCCAAATTTG TTGGAATCAG CCAGTTGGAT ACTTGGACAA GCAATACATT GCGGGCTTTC
TATATTGCTT ATCTTGCTAA GGCTGATGTC ATTAACTGCA GTTGGCACAG TGAGTGGTTG
ATGGAACCGG TGCAGGATGT CGTTGATGAA CTGGCAGGCT ATGGCCGTGA AGGGAAGGGT
ATTGCAGTGG TATTTGCGGC TGGCAACCAG AGTAAATTGA TCACGTCGGG AATGCACGAA
GCAAGTATTG GCAGTGCGAT TGTGGTGGGT GCAAGCAATG CAAAAGGAAA GCCATTGATA
TTTAGCAATT ACGGACCCGC TGTTGATATT TGGGCTTACG GACAAAAAAC GATTAGTACT
GATGAAAATG GAGGCTACAG TTATTTTCTG GGGAGTTCGC TCTCTTCAGT TATCGTATCT
GGTTATATAG CCTTGCTAAT CGGTGCAGAT CAGTCATTAA ACCTGACGCA AATACAACAC
AAGCTAACTC AAATACTGGA ATAG
|
|---|
| Protein sequence | MNNVIKVLLL FFCFFPVVAL AKVESISFMN FSVSVDFHLQ KNGLYKLRGS SFEVQFAPRL
IVKTARAVTA AELAVLIPNA TEITDVFLLT ETRYFLIAFA REEESFAALR KLQALPSILL
VQPDLQQKRA TAEFVDTEFA GAPILAVGLP VYLERAQQES VWPSNGGAGV TVAVIDDGFM
LRHSEFAHLN TSIYYDFAAR ELMQISDEKK KQVSAKHGTK VLGILFGEHN QHEPEGLVPN
AKFVGISQLD TWTSNTLRAF YIAYLAKADV INCSWHSEWL MEPVQDVVDE LAGYGREGKG
IAVVFAAGNQ SKLITSGMHE ASIGSAIVVG ASNAKGKPLI FSNYGPAVDI WAYGQKTIST
DENGGYSYFL GSSLSSVIVS GYIALLIGAD QSLNLTQIQH KLTQILE
|
|---|
| |