Gene SO_0186 details

Gene Information

• Locus tag: SO_0186
• ID: 1168072
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 189555
• End bp: 190100
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637342188
• Product: microcystin dependent protein
• Protein accession: NP_715828
• Protein GI: 24371786
• COG category: [S] Function unknown
• COG ID: [COG4675] Microcystin-dependent protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATC CATTTGTTGG CGAAATTAGA ATGATGGCAA ATACATATGC ACCATACGGC 
TGGGCGTATT GTAATGGGCA GGCAATTGCG ATACAGCAAA ATGCCGTATT GTTTTCAGTG 
ATTGGTATTG CGTTTGGTGG CAATGGCACG ACCATGTTTA ATCTACCTGA TTTTCGAAGT 
GCGGCGCCGA TTGGTACCGG GCAAGGTCCA GGTTTAACGC AGGTTGTGAT TGGTGAGTTT 
AAAGGTGAAG CCGATGTGAC ACTTACCTAT GGCACCATTC CTGCTCACAC CCATACGTTG 
AGTGGTAAAA CTATGTTGGG TGATCAATCG ATTCCAGCGA ACAATTTATA CTTAGCTGCT 
GACGGAGGTG GGGGAGGCAC TGAAAATCTG TTTTACATGC TGCCAGGCAC AACTACACCC 
GACACAAGTT TGTCACCCAA TTGTATTGGT AGCTCAGGTT CCGGTTCATC ACATCCAAAC 
GCACAACCCT TTTTGACATT GGGCTTTTGT ATTGCTTTGC AGGGTGAGTA CCCTGCGCGC 
AATTAA 

 

Protein sequence

MADPFVGEIR MMANTYAPYG WAYCNGQAIA IQQNAVLFSV IGIAFGGNGT TMFNLPDFRS 
AAPIGTGQGP GLTQVVIGEF KGEADVTLTY GTIPAHTHTL SGKTMLGDQS IPANNLYLAA 
DGGGGGTENL FYMLPGTTTP DTSLSPNCIG SSGSGSSHPN AQPFLTLGFC IALQGEYPAR 
N