| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0144 |
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| Symbol | ptrB |
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| ID | 1168037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 151552 |
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| End bp | 153654 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342153 |
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| Product | protease II |
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| Protein accession | NP_715786 |
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| Protein GI | 24371744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTAC CCGGCTGCTC CACTCAAAAA GGGCAAGTTT CTGCGCCCGT TGCGGAAAAA
ATCCCCCATG TGATGACCTT GCATGGCGTC ACGCGCACTG ATGATTACTA TTGGATGCGC
GACGATAAAC GCCAAGATCC CAAAGTGTTA GCGCACCTTA AGGCCGAGAA TCGTTATACC
CAAGCTTACT TTAAGCCGCT TAAGTCATTG CAGGATGGAT TGTTTAACGA GCTGACTGGG
CGGTTAGTGG CTGATGAGTC GAGCGTGCCG TACCAATGGC ATCAGCATAG CTATTACCGC
CGATATCAAG AGGGCAGCGA ATATCCGTTG ATCGCCCGCA AGGGGAGCAA GGGTGTTGAG
CAACTGATGC TCGATGTGAA TGAGCGTGCC AAGGGCCATG AGTTTTATGG TTTAGGTGGC
GTCAGCGTCA GCCCAGATGA AACCATGCTG GCCTTTGGTG AAGATGTGTT AAGCCGCCGC
GTGTATAACA TCTATTTTAA AGATATCGAA TCCGGCGCCA TGATCACCGA TGTGCTTGAA
AACACAGAGG GTCGAATCGT TTGGGGCAAT GATAATCGCC ATGTGTTTTA CATCGCTAAA
GATTTGCAAA CCCTGCTCGG CAACCGGGTA TATCGCCATG AACTCGGTAC GCCACAGTCC
CGTGATGTGC TGGTGTATGA GGAGCAAGAT GATGCTTATT ACATCTCCCT CGGCAAGAGT
TTAGACGAGT CGCAAATTGT GTTGTTCCAC GAGAGCACCA CCACTAGCGA AGTGTCAGTG
CTGGATGCTA ACGATCCTTT AAGCCTGTTC AAACCTGTGC TTGCGCGGGA AGAAGGCCAT
GAATATAGCG TTTCTAAACT GGGCGACAGC TATTACGTCC TCACCAACTG GCAGGCGACA
AACTTTCGCT TAATGAAAGT GGCGATTAAG GATGCTGCCG ATAAATCCAA ATGGCAGGAA
GTGGTTGCTC ACAATCCCAA TGCGCGGCTT GAAGATGAAC TGGTGCTAAA GGATTACCTG
ATTATTCAAA CCCGTGAAAA TGGCCTGACA CGGATTAAAG TGATGCCATT CAATGGTCAA
AAGCCCTTTG AACTGAGTTT TGATGAACCC GCTTATGTGC TCGGCTTGGA TGTTAATGCC
CAGCAAGATA GCGATAAGTT ACGGGTTTTC TACTCGAGCC TGACCACGCC CGAGACGATT
TATGAGTACC ACTTAAGTAA TCCTGATAGA CGCGATCTGC TCAAGCAGGA ACAAGTGCTT
GGCGGTTTTG ATGCCGGAGC GTACCGCGCC GAACGCGTAT TTGTCACCGC CCGCGATGGC
GCTAAGGTGC CAGTGTCCTT GGTGTATCGT AAGGATAAAT TCAAGAAAGA CGGCACCAAT
CCACTGTATC AATATGGTTA TGGTTCATAT GGTTATACGG TAGAGCCTGA CTTTTCGTCG
TCGGTTATCA GTCTGCTCGA CCGCGGCTTT GTGTATGCCA TTGCCCATGT GCGCGGCGGT
GAAATGCTCG GCCGCCCTTG GTACGATGCG GGCAAGTTGC TGAATAAAAA GAATAGCTTT
TATGACTTTA TCGATGTAAC TACGGCCTTA ACCGAGCAAG GTTATGGCGA TAAAAATAAA
GTGGTAGCCG CGGGCGGCAG TGCTGGTGGG CTGTTAATGG GCGCGATTGC CAATATGGCA
CCTGAAAAGT ACTTTGCCAT TGCAGCGCAC GTGCCCTTTG TGGATGTGGT CACGACCATG
CTCGATGAGT CGATTCCGCT GACTACCAAC GAGTACGATG AATGGGGTAA TCCAAACGAC
AAGACCTATT TCGACTATAT GCTCAGCTAC TCACCCTACG ACAATGTTGC CGACCATGAG
TATCCCCACC TATTGGTGAC CACAGGTTTG CATGATTCAC AGGTGCAGTA TTTCGAGCCC
GCTAAATGGG TAGCAAAACT GCGTGAAGTG CAAAACAAAT GGTACAAACT GGACGATAAG
GTGTTGTTAT TCCACGTTGA TATGGATGCC GGCCACGGTG GAAAGAGTGG TCGTTACCGC
CAGTACCAAG ATACAGCGCA GGAATATGCC TTCTTCTTAA GCCTGCTCGG CATGACTAAG
TAG
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| Protein sequence | MLLPGCSTQK GQVSAPVAEK IPHVMTLHGV TRTDDYYWMR DDKRQDPKVL AHLKAENRYT
QAYFKPLKSL QDGLFNELTG RLVADESSVP YQWHQHSYYR RYQEGSEYPL IARKGSKGVE
QLMLDVNERA KGHEFYGLGG VSVSPDETML AFGEDVLSRR VYNIYFKDIE SGAMITDVLE
NTEGRIVWGN DNRHVFYIAK DLQTLLGNRV YRHELGTPQS RDVLVYEEQD DAYYISLGKS
LDESQIVLFH ESTTTSEVSV LDANDPLSLF KPVLAREEGH EYSVSKLGDS YYVLTNWQAT
NFRLMKVAIK DAADKSKWQE VVAHNPNARL EDELVLKDYL IIQTRENGLT RIKVMPFNGQ
KPFELSFDEP AYVLGLDVNA QQDSDKLRVF YSSLTTPETI YEYHLSNPDR RDLLKQEQVL
GGFDAGAYRA ERVFVTARDG AKVPVSLVYR KDKFKKDGTN PLYQYGYGSY GYTVEPDFSS
SVISLLDRGF VYAIAHVRGG EMLGRPWYDA GKLLNKKNSF YDFIDVTTAL TEQGYGDKNK
VVAAGGSAGG LLMGAIANMA PEKYFAIAAH VPFVDVVTTM LDESIPLTTN EYDEWGNPND
KTYFDYMLSY SPYDNVADHE YPHLLVTTGL HDSQVQYFEP AKWVAKLREV QNKWYKLDDK
VLLFHVDMDA GHGGKSGRYR QYQDTAQEYA FFLSLLGMTK
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