Gene SO_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0142 
SymbolribB 
ID1168036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp150203 
End bp150856 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID637342152 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionNP_715784 
Protein GI24371742 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGT CTTTACTTGC TCCTTTTGGT ACTGCTATCG AACGCGTTGA AGCGGGCCTT 
AATGCCCTGC GCCAAGGCCT AGGTGTGTTG GTGGTCGATG ACGAAGATAG AGAAAACGAA 
GGCGACTTAA TTTTTGCCGC CGAGTCGCTG ACCAATGCGC AAATGGCCAT GCTTATTCGC 
GAATGCAGCG GTATCGTGTG TTTGTGTTTA CCGGACGAAA AGGTCAAAGC CCTTGCGCTG 
CCACCTATGG TAGAAAACAA CTCAAGCCAA TATGGCACCG CGTTTACCGT GAGTATCGAA 
GCCAAAGTGG GTGTAACCAC TGGGGTTTCA GCCGCAGACC GTGTCACCAC CATTAAAACC 
GCCATCGCTG ACCATGCTAA ACCAAGCGAT TTGGCTCGCC CAGGCCATGT GTATCCACTT 
CGCGCTCAAC CCGGTGGTGT GTTAACTCGC CGTGGTCATA CCGAAGGCAC TATCGATTTA 
ATGCAACTGG CCGGACTCAA GCCCGCAGGC GTGTTATGTG AAGTCACCAA CCCCGACGGC 
ACTATGGCGC GTCTGCCTGA GATTATCGCC TTTGGTGCCC TGCATAATAT GCCCGTACTC 
ACGATTGAAG ATATCGTGGT TTACCGTAAA TCCTTATTGG CCAACGTAGG CTAA
 
Protein sequence
MNQSLLAPFG TAIERVEAGL NALRQGLGVL VVDDEDRENE GDLIFAAESL TNAQMAMLIR 
ECSGIVCLCL PDEKVKALAL PPMVENNSSQ YGTAFTVSIE AKVGVTTGVS AADRVTTIKT 
AIADHAKPSD LARPGHVYPL RAQPGGVLTR RGHTEGTIDL MQLAGLKPAG VLCEVTNPDG 
TMARLPEIIA FGALHNMPVL TIEDIVVYRK SLLANVG