Gene SO_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0116 
Symbol 
ID1168013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp126481 
End bp127458 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content47% 
IMG OID637342129 
Producthypothetical protein 
Protein accessionNP_715758 
Protein GI24371716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCC CTCGCCGAAC TCAGATAAGC CTTGAAGACA CGCCTTATTA CCATTGCTGT 
AGCCGCGTTG TTCGCCGGGC ATTTTTATGT GGCGATGATG CCTATTCGGG GAAAAATTAT
GACCATCGCC GCGCTTGGGT AGAATCGCTA CTGTTTGAAC TTGAAGCAGT TTTTTCTATT
GATGTGGCAG CGTTTGCGGT GATGTCGAAT CATCTACATG TGGTGCTGCG GGTGGATATC
GACAGTGCAA ATCGTTGGAC TGACCGTGAA GTACTAGAGC AGTGGCATAA GTTGTTTAAA
GGCGATGAAT TAACGCAAAA ATTCGCCAGA GGTGAATTGG TTGAAGCCCA TGAGGTCAAC
CGATTAAAAC ATTCAATCGC CATTTACCGC AGCCGTTTGT GCGATATTAG CTGGTTTATG
CGCTGCTTAA ATGAACCTAT CGCAAGGCAA GCAAATCAAG AAGATAACTG CACAGGTCGG
TTCTGGGAGG GGCGGTTCAA ATCCCAAGCC CTACTCGATG ACGCCGCAGT ATTAGCCTGT
ATGACTTATG TGGATTTAAA TCCGATTAGA GCACAACTCG CTGATACACC AGAACAATCC
GACCATACCA GTATTCAGCG ACGTATTTGG GCTGCATTAA AAGGTGAGCA GCCCAGCAAC
CTACTGCCTT TTATTGGTAA CGAGTGCGAC AACCAACCCA ATGGCATTGC GTTTTCATTG
ATGGATTACC TTCAATTGGT GGATGATACT GGCCGAATTA TTCGCAATGA TAAACGTGGA
TACATCAACG AAAGTAGCGC CAAGATACTG AACAGATTAA ATATCCCCCA TGACAATTGG
CTCAAGCTGA CAACCGAGTT TGGCAAGCTA TTTCATGGCC CAGTAGGAAC TTTGCAAGAG
CTGACCGACT ACTGCGAACA TCTTGAAAAG CGAAGACGGC ACTTTGCGTC AAGCTGCCAG
CACTTTAACT GTAACTGA
 
Protein sequence
MPRPRRTQIS LEDTPYYHCC SRVVRRAFLC GDDAYSGKNY DHRRAWVESL LFELEAVFSI 
DVAAFAVMSN HLHVVLRVDI DSANRWTDRE VLEQWHKLFK GDELTQKFAR GELVEAHEVN
RLKHSIAIYR SRLCDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDDAAVLAC
MTYVDLNPIR AQLADTPEQS DHTSIQRRIW AALKGEQPSN LLPFIGNECD NQPNGIAFSL
MDYLQLVDDT GRIIRNDKRG YINESSAKIL NRLNIPHDNW LKLTTEFGKL FHGPVGTLQE
LTDYCEHLEK RRRHFASSCQ HFNCN