Gene SO_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0112 
Symbol 
ID1168009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp122642 
End bp123265 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID637342125 
Producthypothetical protein 
Protein accessionNP_715754 
Protein GI24371712 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA CCAAGATCAT AAATATTCAA GTTTTAGGGG TTGCGGGTGT TTTAGCAACG 
GCCTTATGTC TGCCTGCTAT TGCAGCAGAG TCGCCTTCCT TTGACTGTGG TAAAGTGCAG 
GCGGGTAGCA TCGAAGAGAT GGTGTGTCGG GATGCGGGCT TAATTAAGTT AGATAGGCAA 
TTGGCGGATG TTTATGCTAA GGCCACTGAA AAAGCTAAGA ATGAGCAGCC CCCTGTACTC 
AAAGCAATGC AACGTGGCTG GGTAAAAGGT CGTAATGAAT GTTGGAAGAG TGAAGATAAA 
CGCACCTGCG TTGAATCGAG TTACCAAACT CGGATTGCAC AGTTACAGGC GCAATATCGC 
CTCGTTGAAA TGACTGGCCC CGTGTTTTAT ACCTGTGATG GAAATCCTGC GAATGAAGTT 
GTGGTCAGTT ATTTTAAAAC TGAGCCAGCG ACCCTGATTG CCGAGCGTGG CGATCAAACG 
TCGCTGATGT TTATCCAGCG CAGCGCCAGT GGCGCGAAAT ATCAGGGCCA AAATGAGAGT 
CTGTGGGAGC ACCATGGTGA AGCGAGAATC GTTTGGGGAT ATGAAACGCC AGAAATGACC 
TGTAAGGTCA AAACACCTAA ATGA
 
Protein sequence
MKLTKIINIQ VLGVAGVLAT ALCLPAIAAE SPSFDCGKVQ AGSIEEMVCR DAGLIKLDRQ 
LADVYAKATE KAKNEQPPVL KAMQRGWVKG RNECWKSEDK RTCVESSYQT RIAQLQAQYR 
LVEMTGPVFY TCDGNPANEV VVSYFKTEPA TLIAERGDQT SLMFIQRSAS GAKYQGQNES 
LWEHHGEARI VWGYETPEMT CKVKTPK