| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0105 |
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| Symbol | selA |
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| ID | 1168002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 114238 |
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| End bp | 115659 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637342117 |
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| Product | selenocysteine synthase |
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| Protein accession | NP_715747 |
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| Protein GI | 24371705 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCC AAGTACCCGA TACACCCCAA GCCCTGTACC GCGCGCTGCC TTCGATGGAC
AGTCTGCTCG CCGATGCGGT GTTAGCGCCC TTGCTGCAAC GCTATGGTAA AGCGGCAGTA
AAAGCGGCGT TGGATAGTCA GTTACGCACG GCGCGTGAGC TGATAGCCCA GGAGCGGCGT
TTACCTGCTT GGTGTGCTAA CCCGTCGTTA CTAAACGGAT ATTTGGTTGA TCAGTTGTCA
AAGGACTATA GCCATAGTCT AAAACCCGTA TGGAACCTCA CCGGTACCAT TTTGCATACC
AATCTTGGTC GTGCACAACA GTCTGAGGCG GCCATTCGTG CGGTAACCTC TGTGATGCGT
TATCCCACGC CGCTGGAATT TGAATTAGCC GCCGGTGAGC GTGGCCATAG GGATAATGCC
ATTAGTGGGT TAATCCAACG TCTGACTGGG GCAGAAGCTT GCTGCGTGGT GAATAACAAC
GCCGCCGCTG TGTTGCTGAT GTTGTCGGCG GTAGCGGCGG GTAAAGAAGT GATCGTCTCC
CGCGGTGAGC TGGTGGAAAT TGGCGGCGCA TTTCGCATTC CAGACATTAT GCGCCAAGCG
GGCTGCACCT TAGTCGAGGT CGGCAGTACT AATCGTACTC ACCTTAAGGA CTATGAGCAG
GCGATAACCG AGAATACCGC CGCCATTATG AAGGTGCATA CCAGCAACTA TCATATCAGT
GGTTTTACCG CCGCAGTGGA GGAGGCTAGG CTGGGTCAGT TATGCCGTGA GCGTGGCATA
TTACTCATTT CGGATCTTGG CAGCGGTTCA CTTACTGATC TGCGCCGCTT TGGTCTAAAA
CAAGAACCGA CCCCCCAAGC TATGCTGGCG GATGGTGTCG ATTTAGTGAG CTTCTCCGGC
GATAAACTCC TCGGCGGCCC GCAATCGGGC TTGATTGTCG GTAAACAGGC GTTAATTAAC
AAGCTTCAAA GTCATCCGCT AAAGCGTGCA TTGCGCTGCG ATAAGCTGAT TCTCGCGGCG
CTCGAGGCAA CGCTGATCCA CTATCTCAAC CCCGAAACCT TAGACAAAGA ACTGCCAATT
ATGGCCAAAT TTGCCCGCAG CCAAGCAGAG TTGCGCCAAA TCGGTGAGCG CCTGCAGCAA
GCCTTAGCGC CGCTGTTTAC CCCGAGCTAT GGCCTTGAGT TAGTCGAGTG CCAAACTCAA
GTCGGTAGCG GTTCGCAGCC AGATACCTTT TTGCCCTCAA TCGGCCTGTG CTTTAACGCG
CAAGAGGGTG GCAGTTTAAC GCTGCTCGAG CAGCATTTTA AGCAGGCGCA GCGCCCTGTG
ATTGGTCGAA TGACCCAAGA TCAACTTCGC CTCGACCTGC GCGGTATCGA TGATGAGGCC
GAATTATTGG CCGAACTCAG CACCTTAGGT GTGCAGCTAT GA
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| Protein sequence | MMTQVPDTPQ ALYRALPSMD SLLADAVLAP LLQRYGKAAV KAALDSQLRT ARELIAQERR
LPAWCANPSL LNGYLVDQLS KDYSHSLKPV WNLTGTILHT NLGRAQQSEA AIRAVTSVMR
YPTPLEFELA AGERGHRDNA ISGLIQRLTG AEACCVVNNN AAAVLLMLSA VAAGKEVIVS
RGELVEIGGA FRIPDIMRQA GCTLVEVGST NRTHLKDYEQ AITENTAAIM KVHTSNYHIS
GFTAAVEEAR LGQLCRERGI LLISDLGSGS LTDLRRFGLK QEPTPQAMLA DGVDLVSFSG
DKLLGGPQSG LIVGKQALIN KLQSHPLKRA LRCDKLILAA LEATLIHYLN PETLDKELPI
MAKFARSQAE LRQIGERLQQ ALAPLFTPSY GLELVECQTQ VGSGSQPDTF LPSIGLCFNA
QEGGSLTLLE QHFKQAQRPV IGRMTQDQLR LDLRGIDDEA ELLAELSTLG VQL
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