Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0102 |
Symbol | fdnH |
ID | 1167999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 111720 |
End bp | 112634 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637342114 |
Product | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit |
Protein accession | NP_715744 |
Protein GI | 24371702 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACTC AAGATATCAT TCAACGTTCC GGCACTTCGC AAGCCACTCC GCCTGCACAG GCAAGAGTGG GTGGCGTGAA GCAAATTGCG AAGTTGTTTG ACGCGACTAA GTGTAATGGC TGTAAAGCCT GTCAGGTAGC TTGCTCAGAA TGGAATGACC TGCGTGAAGA GGTGGGTTCG TTCCAAGGGA CTTATCAAAA CCCTGCATCT CTGTCTCCAG AGTGCTGGAC CTTGATGAAG TACAACGAGA TCGAAGACCA AGGCAAATTG CGCTGGCAGT TTACTCACTC TGCCTGTATG CACTGCGCCG ATCCCGCTTG CTTAAAGGCT TGCTCGACCT CTGGCGCAAT CATTCAGCAT GCCAATGGCA CTGTGGATTT CGATTCGGAC AAATGTATTG GCTGTGGTTA TTGTGCCAGT GCCTGCCCAT TCGATATCCC GAAGATCAGC GCCGTCGACA ACAAGGCCTA CAAGTGCACT ATGTGTTCTG ACCGCTTGGC TGTTGGGCTG GAACCTTCCT GCGTTAAGTC CTGTACCACG GGTGCGCTGC GTTTTGGTAC GCGCGAAGAC ATGCTGTTCG CCTCCGAAAA GCGTGTTAAC GAGCTGAAAG AACGTGGTTT CCCTAAGGCG GGACTCTATA ACCCAGAGGG CGTGGGTGGT ACTGGCATGC TGATGATATT GCATGATGTC ACTCAGCCTG AAACCTACGA AATGCCTAAG GATCCGCAAA TCCCATTGTC TGTCACCCTG TGGCAGGACT GGGTGAAACC ACTGGGTACT GTCGGACTTC TTGCGACGGC TGCTGTGGCT TGCCTGCATA AGATCACCGT CGGTCGCAAC ATAGTGGAAG AGGACCAACC CGGCTATCAA CCGCCAGAGG AAGAGGTTAA GCAAGAAGAG GAGGCCAAGA AATGA
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Protein sequence | MATQDIIQRS GTSQATPPAQ ARVGGVKQIA KLFDATKCNG CKACQVACSE WNDLREEVGS FQGTYQNPAS LSPECWTLMK YNEIEDQGKL RWQFTHSACM HCADPACLKA CSTSGAIIQH ANGTVDFDSD KCIGCGYCAS ACPFDIPKIS AVDNKAYKCT MCSDRLAVGL EPSCVKSCTT GALRFGTRED MLFASEKRVN ELKERGFPKA GLYNPEGVGG TGMLMILHDV TQPETYEMPK DPQIPLSVTL WQDWVKPLGT VGLLATAAVA CLHKITVGRN IVEEDQPGYQ PPEEEVKQEE EAKK
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