Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0098 |
Symbol | hutH |
ID | 1167996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 106536 |
End bp | 108077 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637342111 |
Product | histidine ammonia-lyase |
Protein accession | NP_715740 |
Protein GI | 24371698 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAG TCAATCATTT AGTATTAACG CCCGGCAGTT TAAGTCTGGC GCAACTGCGT GAAATCAGCC GCCATAAGCT GACACTCGAA CTGGCACCAG AGGCGATAAA CGACATCAAC ATCAGCGCGC AAATCGTGCA AAAGGTGTTG GATGAAGGTC GTACCGTTTA CGGCATCAAC ACAGGTTTTG GTCTGCTGGC CAACACTAAG ATTGCCCCTG AGGATCTGCA ATTACTGCAA CGCTCTATCG TGTTATCCCA CGCAGCAGGC ACGGGCCAAT ATATGCAGGA CGCCACTGTG CGCCTGATGA TGGTGTTAAA GATCAACTCC TTAAGCCGTG GCTTCTCGGG TATCCGTTTA GAGGTGATTA ACTTCCTTAT CAGCCTAGTG AATGCCGAGG TTTACCCTTG CGTGCCTGAA AAAGGTTCTG TGGGCGCCTC TGGCGACTTA GCGCCGTTAG CCCATATGTG TTTGCCGCTG TTGGGTGAAG GCGAGATGAG CTACCAAGGG CAGATTATTT CGGCCGCCGA AGGCTTAGAA ATCGCCGGCC TCAAGCCAAT CGATTTAGCC GCGAAGGAAG GCTTAGCCCT GCTCAACGGT ACTCAGGCTT CTACCGCGCT GGCGCTGGAA GGCTTGTTCC ACGCTGAAGA CTTGTTTGCT GCCAGCTCAG TGATTGGCGC CATGAGCGTC GAGGCGGCCA TGGGTAGCCG CAGTCCGTTC GATCCTCGCA TCCATGCGGC CCGTGGTCAA AAAGGTCAAA TCGATTCAGC TATGGTGTTC CGTTATCTGC TGGGTGAAGA GTCTGAAATC AGTTTAAGCC ATGCAAACTG TGAAAAGGTA CAAGATCCTT ACTCACTGCG TTGCCAACCA CAGGTATTAG GTGCTTGCTT GACCCAAATC CGCCAAGCGG CCGAAGTATT AGCGACCGAA GCCAATGGCG TGACCGATAA CCCACTGGTG TTCCAAGACA CTGGCGATAT TATCTCCGGC GGTAACTTCC ACGCTGAGCC AGTTGCTATG GCCGCCGATA ACTTGGCGAT TGCGATTGCT GAATTAGGCG CGATTGCAGA GCGTCGTATC GCGCTGCTCA TCGACTCTAG CCTGTCTAAA TTGCCACCTT TCCTCGTGAA AAACGGCGGG GTGAACTCGG GCTTTATGAT CGCTCAAGTA ACGGCGGCAG CATTAGCCTC TGAAAACAAA ACTTACGCCC ATCCAGCATC GGTTGACAGT TTACCTACCT CGGCTAACCA AGAAGATCAC GTCTCTATGG CGACCTTTGC GGCGCGCCGT TTACGGGATA TGAGCGAAAA CACCCGCGGC GTATTAGCGA TTGAATTATT AGCTGCCGCC CAAGGGTTGG ATTTCCGCGC ACCATTAACG CCAAGCAAGG CGGTGGCGCA GGCTAAGGCC GAGCTGCGCG AAGTGGTTGC CTACTATGAT AAAGACAGAT ACTTCGCACC GGATATCGAA GCGGCCACGG ATCTACTTTA CACCGCCAGC TTTAATGCGT ATTTGCCCTT AGGTGTTTTA CCTAGCCTCT GA
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Protein sequence | MKSVNHLVLT PGSLSLAQLR EISRHKLTLE LAPEAINDIN ISAQIVQKVL DEGRTVYGIN TGFGLLANTK IAPEDLQLLQ RSIVLSHAAG TGQYMQDATV RLMMVLKINS LSRGFSGIRL EVINFLISLV NAEVYPCVPE KGSVGASGDL APLAHMCLPL LGEGEMSYQG QIISAAEGLE IAGLKPIDLA AKEGLALLNG TQASTALALE GLFHAEDLFA ASSVIGAMSV EAAMGSRSPF DPRIHAARGQ KGQIDSAMVF RYLLGEESEI SLSHANCEKV QDPYSLRCQP QVLGACLTQI RQAAEVLATE ANGVTDNPLV FQDTGDIISG GNFHAEPVAM AADNLAIAIA ELGAIAERRI ALLIDSSLSK LPPFLVKNGG VNSGFMIAQV TAAALASENK TYAHPASVDS LPTSANQEDH VSMATFAARR LRDMSENTRG VLAIELLAAA QGLDFRAPLT PSKAVAQAKA ELREVVAYYD KDRYFAPDIE AATDLLYTAS FNAYLPLGVL PSL
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