Gene SO_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0096 
SymbolhutC 
ID1167994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp103967 
End bp104674 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content54% 
IMG OID637342109 
Producthistidine utilization repressor 
Protein accessionNP_715738 
Protein GI24371696 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTACGC CTAAGTTTGC AGAAATAAAG CAATACATCA CTGGCTGTAT CGAGTCCGGT 
GAGTGGGAAG AAAATGCCCG CGTGCCCTCG GAAAATCAGC TGGCTGAGCT GTTTGTCTGT
AGCCGGATGA CGGCGCGTCG CGCCTTGACA GAGCTGACAG ATAACGGCGT GCTTGAGCGT
TCGCAGGGGC TTGGCACCTT TGTGGCGGGG CGTAAGTCGC AATCCTCCAT GTTGGCGATC
CGCAATATCG CCGATGAAAT TAAAGACCGT GGCCATGGTT ACAGTGTGCA GCAATTAGCA
CTTGAGCAAG TGAACGCTAC CGCGCCGATT GCTATCGCAT TGGCGCTCGA CGTCGGCAGT
CCGGTATTTC ATTCAATATT AGTGCATTGC GAGCAGGGCG TGCCGCTGCA AGTCGAGGAG
CGTTATGTAA ATCCCGCCTT TGCGCCTGAC TACTTAGTGC AGGATTTTAG CGAGCAAACA
CCCCATGAAT ACCTGTCGCA GGTGGCTCCG CTGACCGAGG CGCACCACAC CATCGAAGCC
ATTATCGCCA GTAGCGAATT GCAGCAGAGG TTAGCCATTC CGGCGACCGA ACCCTGCTTA
CAGATTTCAC GCCGCACTTG GTCACGCCAA GGGGTGGTGA GTTTTGCCAA ATTAGTACAT
CCGGGTAGCC GCTTTAAACT CGGTGGTCAC CTGACATTCA ATAAATAA
 
Protein sequence
MATPKFAEIK QYITGCIESG EWEENARVPS ENQLAELFVC SRMTARRALT ELTDNGVLER 
SQGLGTFVAG RKSQSSMLAI RNIADEIKDR GHGYSVQQLA LEQVNATAPI AIALALDVGS
PVFHSILVHC EQGVPLQVEE RYVNPAFAPD YLVQDFSEQT PHEYLSQVAP LTEAHHTIEA
IIASSELQQR LAIPATEPCL QISRRTWSRQ GVVSFAKLVH PGSRFKLGGH LTFNK