Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0096 |
Symbol | hutC |
ID | 1167994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 103967 |
End bp | 104674 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637342109 |
Product | histidine utilization repressor |
Protein accession | NP_715738 |
Protein GI | 24371696 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTACGC CTAAGTTTGC AGAAATAAAG CAATACATCA CTGGCTGTAT CGAGTCCGGT GAGTGGGAAG AAAATGCCCG CGTGCCCTCG GAAAATCAGC TGGCTGAGCT GTTTGTCTGT AGCCGGATGA CGGCGCGTCG CGCCTTGACA GAGCTGACAG ATAACGGCGT GCTTGAGCGT TCGCAGGGGC TTGGCACCTT TGTGGCGGGG CGTAAGTCGC AATCCTCCAT GTTGGCGATC CGCAATATCG CCGATGAAAT TAAAGACCGT GGCCATGGTT ACAGTGTGCA GCAATTAGCA CTTGAGCAAG TGAACGCTAC CGCGCCGATT GCTATCGCAT TGGCGCTCGA CGTCGGCAGT CCGGTATTTC ATTCAATATT AGTGCATTGC GAGCAGGGCG TGCCGCTGCA AGTCGAGGAG CGTTATGTAA ATCCCGCCTT TGCGCCTGAC TACTTAGTGC AGGATTTTAG CGAGCAAACA CCCCATGAAT ACCTGTCGCA GGTGGCTCCG CTGACCGAGG CGCACCACAC CATCGAAGCC ATTATCGCCA GTAGCGAATT GCAGCAGAGG TTAGCCATTC CGGCGACCGA ACCCTGCTTA CAGATTTCAC GCCGCACTTG GTCACGCCAA GGGGTGGTGA GTTTTGCCAA ATTAGTACAT CCGGGTAGCC GCTTTAAACT CGGTGGTCAC CTGACATTCA ATAAATAA
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Protein sequence | MATPKFAEIK QYITGCIESG EWEENARVPS ENQLAELFVC SRMTARRALT ELTDNGVLER SQGLGTFVAG RKSQSSMLAI RNIADEIKDR GHGYSVQQLA LEQVNATAPI AIALALDVGS PVFHSILVHC EQGVPLQVEE RYVNPAFAPD YLVQDFSEQT PHEYLSQVAP LTEAHHTIEA IIASSELQQR LAIPATEPCL QISRRTWSRQ GVVSFAKLVH PGSRFKLGGH LTFNK
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