Gene SO_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0088 
Symbol 
ID1167986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp97916 
End bp98515 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content42% 
IMG OID637342101 
Producthypothetical protein 
Protein accessionNP_715730 
Protein GI24371688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGGA TATTTACTTT GCTGCTACTG ACTTTTTCCA GCCAAAGCTT AGCCAGTTCG 
TGGCCTGTAC CTAAGTCGAT TGTGATGGTC AGCCCTGATG GAGGAGTCAT TGCGCGACTC 
CACTCTGGCT CATTTCCCTT AGACAAACCT GAGTCAGCGC AAATGAGTAT TTTTACCTGG 
GATGAAAAGT CTGGATATGT GCTTTCCGAG CATTACCAAC TACCTTATCG TTTTGCTCCT 
GCTAAATTTG CAGTAAACGA TAATGGATTT GTGATTACCG TGGGTAAATA TGTTGCTGAA 
GAAACTGGCC CAGATATAGG CATTTTTAAT CCTCAAGGGC TGCAAATACA GTCCTATACC 
TTAGAGCAGC TTTTCCCTAA TACAACACAA AAACAGCTAT TAATCGCGCA GTCACAAAAA 
TTAACAAGTG AATGGCAAGA GCATCAACAA AATGTTCCTC AATGGTATTG CCTGTCGGAG 
CCAGAGGTCA TTATGAGTAA TGCTTTCTCT GTTAGGCATG AACTCGGCGC TTTGCTGATT 
TATGTGGATG AGAATCCATT TGAAAGCTAC TTGATTGAGA GTGGATGCAC TAGCCTCTGA
 
Protein sequence
MLRIFTLLLL TFSSQSLASS WPVPKSIVMV SPDGGVIARL HSGSFPLDKP ESAQMSIFTW 
DEKSGYVLSE HYQLPYRFAP AKFAVNDNGF VITVGKYVAE ETGPDIGIFN PQGLQIQSYT 
LEQLFPNTTQ KQLLIAQSQK LTSEWQEHQQ NVPQWYCLSE PEVIMSNAFS VRHELGALLI 
YVDENPFESY LIESGCTSL