Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0075 |
Symbol | |
ID | 1167973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 87148 |
End bp | 88854 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637342088 |
Product | AMP-binding family protein |
Protein accession | NP_715717 |
Protein GI | 24371675 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCCC CTTGGCATCA AGTCAGTTGG CAGGCATTTG ATGAAATCAG CCATAAAATC GCACAAGTGT TAATTCAACT CGGCGTACAA GTGCAAGACC GCTGCGTGAT TCTGTCGCAA AACTGCCCTC AATGGACCTG TGCCGATGTC GGCACCCTGA AAAGCCGCGC CATTGTGGTA CCGATTTATC CAACCAGCAC TGTCGAGCAG GCGAGCTTTA TCGTTAACGA TGCTGCTGCC AAGGTGATTT TTGTCGACGA TGCCAAGCAA TATGCGCTGG CCTGTGAGCT GCAAACGCTT TGCCCGACCT TAGAGCATGT GATTGTGTTC GATGCCGCGG TGCAACTGGC TCAAGATAAA CCTCAGCATA AACATTTAGA TAGCTTACTG GCGTTGGAAT ATGACCAAAG TGCTGAGCTC GAACAGCGTT TAAAAGACGC TAATCTCGAT GATTTGTTAA CCCTGATTTA TACCTCCGGC ACGACTGGCG ACCCTAAGGG CGTGATGCTG GATTACCGCA ATATGGCCTC GACTGTGCAT CAGCACGATC TGATTTTGCC TTTCAAAACC GGCGATGTGT CTTTGGCTTT CCTGCCGCTT AGCCATGTGT TTGAGCGTGG CTGGAGCTTC TATGTGCTGT GCCGCGGTGG CCGCAATGTG TATTTGCAGA ATACCCAAAG AGTAAAAGAG GCGATTAGTG CTGTGCGTCC GCATACCCTA TGCGTGGTGC CGCGTTTCCT TGAGAAGGTT TACAGTGCCG TACAGGATAA AGTCGCTAAA TCTGCCGAGG GCCGTAAAAA ATTATTCGCT TGGGCGATGG GTGTTGGCGA ACGTCAGTTT GAAGTCAGCC AAGGCCGTGT TAAGGGCGGT TTGTGGTTAT CTTTGCAGTG GCGTTTGGCG AACAAGCTGG TTTACAGCAA GTTGCAGGCT GTACTCGGTG GACGGTTAAA GTTTATGCCC TGTGGCGGTG CTGCACTCGA TTTAAATGTG GCGTCTTTCT TCCATGCGAT TGGTATTCCT GTGCTTTGTG GTTATGGCAT GACCGAAACA AACGCCACAG TGACCTGTAA CACCTTAGAC AATCGTGTTG CGGGATCAAA CGGTAAAGTC TTGCCCGAAA TCCAAATTAA GCTGGGTAAG GACGACGAGA TTTTAGTCCG TGGCGATACC GTGATGCGCG GTTATTACAA TCGCCCTGAA GATACTGCTG CTGCCTTTGA AGACGGCTGG TTAAAGACGG GCGATGCGGG TCGACTCGAT GCCCACGGCA ATTTATTTAT TACCGACCGC ATTAAAGAAT TAATGAAAAC CTCCAACGGC AAATACATTG CGCCGCAGCG GGTTGAGGGC ACAGTGGGTC GTTGCCCTTT TATCGAGCAG GTGGCGGTGA TTGCCGATGC TCGTAACTAT GTGACTGCGC TGATTGTGCC AGCTTTTGAA TCTCTCGAAG CGTGGGCGAA GGAAAAGGGC TTAAAGTATG AGTCGCCCAT TGAACTCTTG CGTCACAGCC ATGTGGTTGA GCATTTTGAA CAACGCTTAA AGCATCTACA GCAGGAACTG GCAGGATTTG AGCAAATCAA AAAGTTTACC CTGCTGCCGG AAGCTTTTTC GATGGAGGCG GGGTTAATCA CTCCGACGCT TAAGCTGCGC CGCAAAATGA TTTATCACAA GTACGTCCAT GAAATAAATG CTATGTACAA TAATTGA
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Protein sequence | MAAPWHQVSW QAFDEISHKI AQVLIQLGVQ VQDRCVILSQ NCPQWTCADV GTLKSRAIVV PIYPTSTVEQ ASFIVNDAAA KVIFVDDAKQ YALACELQTL CPTLEHVIVF DAAVQLAQDK PQHKHLDSLL ALEYDQSAEL EQRLKDANLD DLLTLIYTSG TTGDPKGVML DYRNMASTVH QHDLILPFKT GDVSLAFLPL SHVFERGWSF YVLCRGGRNV YLQNTQRVKE AISAVRPHTL CVVPRFLEKV YSAVQDKVAK SAEGRKKLFA WAMGVGERQF EVSQGRVKGG LWLSLQWRLA NKLVYSKLQA VLGGRLKFMP CGGAALDLNV ASFFHAIGIP VLCGYGMTET NATVTCNTLD NRVAGSNGKV LPEIQIKLGK DDEILVRGDT VMRGYYNRPE DTAAAFEDGW LKTGDAGRLD AHGNLFITDR IKELMKTSNG KYIAPQRVEG TVGRCPFIEQ VAVIADARNY VTALIVPAFE SLEAWAKEKG LKYESPIELL RHSHVVEHFE QRLKHLQQEL AGFEQIKKFT LLPEAFSMEA GLITPTLKLR RKMIYHKYVH EINAMYNN
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