Gene SO_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0075 
Symbol 
ID1167973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp87148 
End bp88854 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content50% 
IMG OID637342088 
ProductAMP-binding family protein 
Protein accessionNP_715717 
Protein GI24371675 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCC CTTGGCATCA AGTCAGTTGG CAGGCATTTG ATGAAATCAG CCATAAAATC 
GCACAAGTGT TAATTCAACT CGGCGTACAA GTGCAAGACC GCTGCGTGAT TCTGTCGCAA
AACTGCCCTC AATGGACCTG TGCCGATGTC GGCACCCTGA AAAGCCGCGC CATTGTGGTA
CCGATTTATC CAACCAGCAC TGTCGAGCAG GCGAGCTTTA TCGTTAACGA TGCTGCTGCC
AAGGTGATTT TTGTCGACGA TGCCAAGCAA TATGCGCTGG CCTGTGAGCT GCAAACGCTT
TGCCCGACCT TAGAGCATGT GATTGTGTTC GATGCCGCGG TGCAACTGGC TCAAGATAAA
CCTCAGCATA AACATTTAGA TAGCTTACTG GCGTTGGAAT ATGACCAAAG TGCTGAGCTC
GAACAGCGTT TAAAAGACGC TAATCTCGAT GATTTGTTAA CCCTGATTTA TACCTCCGGC
ACGACTGGCG ACCCTAAGGG CGTGATGCTG GATTACCGCA ATATGGCCTC GACTGTGCAT
CAGCACGATC TGATTTTGCC TTTCAAAACC GGCGATGTGT CTTTGGCTTT CCTGCCGCTT
AGCCATGTGT TTGAGCGTGG CTGGAGCTTC TATGTGCTGT GCCGCGGTGG CCGCAATGTG
TATTTGCAGA ATACCCAAAG AGTAAAAGAG GCGATTAGTG CTGTGCGTCC GCATACCCTA
TGCGTGGTGC CGCGTTTCCT TGAGAAGGTT TACAGTGCCG TACAGGATAA AGTCGCTAAA
TCTGCCGAGG GCCGTAAAAA ATTATTCGCT TGGGCGATGG GTGTTGGCGA ACGTCAGTTT
GAAGTCAGCC AAGGCCGTGT TAAGGGCGGT TTGTGGTTAT CTTTGCAGTG GCGTTTGGCG
AACAAGCTGG TTTACAGCAA GTTGCAGGCT GTACTCGGTG GACGGTTAAA GTTTATGCCC
TGTGGCGGTG CTGCACTCGA TTTAAATGTG GCGTCTTTCT TCCATGCGAT TGGTATTCCT
GTGCTTTGTG GTTATGGCAT GACCGAAACA AACGCCACAG TGACCTGTAA CACCTTAGAC
AATCGTGTTG CGGGATCAAA CGGTAAAGTC TTGCCCGAAA TCCAAATTAA GCTGGGTAAG
GACGACGAGA TTTTAGTCCG TGGCGATACC GTGATGCGCG GTTATTACAA TCGCCCTGAA
GATACTGCTG CTGCCTTTGA AGACGGCTGG TTAAAGACGG GCGATGCGGG TCGACTCGAT
GCCCACGGCA ATTTATTTAT TACCGACCGC ATTAAAGAAT TAATGAAAAC CTCCAACGGC
AAATACATTG CGCCGCAGCG GGTTGAGGGC ACAGTGGGTC GTTGCCCTTT TATCGAGCAG
GTGGCGGTGA TTGCCGATGC TCGTAACTAT GTGACTGCGC TGATTGTGCC AGCTTTTGAA
TCTCTCGAAG CGTGGGCGAA GGAAAAGGGC TTAAAGTATG AGTCGCCCAT TGAACTCTTG
CGTCACAGCC ATGTGGTTGA GCATTTTGAA CAACGCTTAA AGCATCTACA GCAGGAACTG
GCAGGATTTG AGCAAATCAA AAAGTTTACC CTGCTGCCGG AAGCTTTTTC GATGGAGGCG
GGGTTAATCA CTCCGACGCT TAAGCTGCGC CGCAAAATGA TTTATCACAA GTACGTCCAT
GAAATAAATG CTATGTACAA TAATTGA
 
Protein sequence
MAAPWHQVSW QAFDEISHKI AQVLIQLGVQ VQDRCVILSQ NCPQWTCADV GTLKSRAIVV 
PIYPTSTVEQ ASFIVNDAAA KVIFVDDAKQ YALACELQTL CPTLEHVIVF DAAVQLAQDK
PQHKHLDSLL ALEYDQSAEL EQRLKDANLD DLLTLIYTSG TTGDPKGVML DYRNMASTVH
QHDLILPFKT GDVSLAFLPL SHVFERGWSF YVLCRGGRNV YLQNTQRVKE AISAVRPHTL
CVVPRFLEKV YSAVQDKVAK SAEGRKKLFA WAMGVGERQF EVSQGRVKGG LWLSLQWRLA
NKLVYSKLQA VLGGRLKFMP CGGAALDLNV ASFFHAIGIP VLCGYGMTET NATVTCNTLD
NRVAGSNGKV LPEIQIKLGK DDEILVRGDT VMRGYYNRPE DTAAAFEDGW LKTGDAGRLD
AHGNLFITDR IKELMKTSNG KYIAPQRVEG TVGRCPFIEQ VAVIADARNY VTALIVPAFE
SLEAWAKEKG LKYESPIELL RHSHVVEHFE QRLKHLQQEL AGFEQIKKFT LLPEAFSMEA
GLITPTLKLR RKMIYHKYVH EINAMYNN