| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0069 |
|---|
| Symbol | |
|---|
| ID | 1167967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 80667 |
|---|
| End bp | 81806 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637342082 |
|---|
| Product | transport protein, putative |
|---|
| Protein accession | NP_715711 |
|---|
| Protein GI | 24371669 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TCATCGCAAT GGTTCGCAAG GAACTGATCG ACGCCGCCCG CGATAAACGC
TCTGTGATGG CGGGACTCTA CTACGCCATC GGTACGCCAC TGATCATGTG CGGCCTGTTT
ATGGTGTTAA TCGGTCAGCT CACTAGCCCG GACGATCTTA AAATCAGCAT CACTAATCCC
GACAAAGCGC CGGACTTAGT GAGATTTTTG TCCAATAAGG GCATTACCCA AGGCGAAGCT
GGCGCGAAGG ATCTCAAAGC CATCGAGCTG ATTATCAGCC CAGACTATGC CAAGCAAATG
AACCAAGGCA AAGGCGCCGA GATCACTATC GTGGCCGATA ACTCAGAGGA AAAACTGCAA
AACTCGATTC GTCGTTTAGA GAAACAGTTA CAGGCCTATA GCGCCGAAAT GGGCAGCCTG
CGCTTAATCG CCCGTGGTAT CGACCCTCGC GTGGTGCAAC CAATAAAAGT GAATGTGCAC
GACCAAGCCA CGACCGACTC TAAGGGCGGG ATGATCTTAG GTATCGCCAT TTTCACTATG
ATTTACTCAG TGTTTATCTC GGGGATGAAC TTGGCCATCG ACACCAGCGC CGGTGAGCGT
GAGCGTAACT CCTTGGCACT GTTACTTAGC CATCCACTGA CCACGCGCCA ATTAGTGCTC
TCAAAGATCA TCACTGTCGG CCTGTTTGCC CTGCTCGGTT TAGTGTTGAT TTTATTAGTA
TCTAAGGTCG CCTATACCTT TGTGCCTTGG CAGGAACTCG GCTTTAGCGT CAGCATTACC
AGTGAGTTTA TGGCACTGAT GCTATTGGTC GGTATCCCCG TCGCCCTGAT GGCTGCCTGT
TTGCAATTGT TTGTGTCCTT TATGGCCAAA ACCTTTAAGG AAGCACAGTC CTACCTGACC
ATGGTGCTGT TTGTGCCTTT GGCACTGTCG ATGGCAGCCA GCTACAACAT TGCGCCCGAC
GTACTGCAGT GGTTGCCGGT ATCCGGTCAA CAACAGGCGC TGATGGACTT TATTAAAGGT
AAAGACATGA ACATGCTGCA ATTATTAGTA TCGACGCTAG GCACGCTGGC CATCGCCCTA
GTGTTGGCAT TCGGCATGGA AAAATCGTTA AAGAGTGAAA AAGTGATCTT CGGTTTATAA
|
|---|
| Protein sequence | MNKIIAMVRK ELIDAARDKR SVMAGLYYAI GTPLIMCGLF MVLIGQLTSP DDLKISITNP
DKAPDLVRFL SNKGITQGEA GAKDLKAIEL IISPDYAKQM NQGKGAEITI VADNSEEKLQ
NSIRRLEKQL QAYSAEMGSL RLIARGIDPR VVQPIKVNVH DQATTDSKGG MILGIAIFTM
IYSVFISGMN LAIDTSAGER ERNSLALLLS HPLTTRQLVL SKIITVGLFA LLGLVLILLV
SKVAYTFVPW QELGFSVSIT SEFMALMLLV GIPVALMAAC LQLFVSFMAK TFKEAQSYLT
MVLFVPLALS MAASYNIAPD VLQWLPVSGQ QQALMDFIKG KDMNMLQLLV STLGTLAIAL
VLAFGMEKSL KSEKVIFGL
|
|---|
| |