Gene SO_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0061 
Symbol 
ID1167960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp68407 
End bp68871 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID637342075 
ProductNLP/P60 family lipoprotein 
Protein accessionNP_715703 
Protein GI24371661 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TATTAATCGT TATCTTAGCC TTAGGTCTTG GCGCCTGTGC TAGCGCGCCA 
GAACCTAAGC CTGTGGTAAA GCAAGTTGAA CCTGTCTCTG TGTGGAATGA TAGCAATATC 
GCTGATCTGC ATTCCGAATG GCGCGGCGTG CCCTATCGCT TAGGGGGCGC TACTAAAAAA 
GGCATTGATT GCTCAGCCTT TGTTTCTGTG GCCTATCAAA AAATGTTGGG CATGACACTG 
CCGCGCACTG TTCAAGAACA ACAGGCGCTT GGTAAACCTG TGGCGCGGGA TAAGCTGCGT 
AAAGGTGATT TAGTATTTTT TAAAACCGGC TGGAGTACGC ATCATGTGGG CATTTATGTG 
GGCGAAAATA ATTTTCTCCA TGTTTCCACG AGCCAAGGGG TGAAGATTTC GAGCCTGCTT 
AATAGCTATT GGGCATCTAA GTATTGGAAT GCTAGGCGAA TTTAA
 
Protein sequence
MKKLLIVILA LGLGACASAP EPKPVVKQVE PVSVWNDSNI ADLHSEWRGV PYRLGGATKK 
GIDCSAFVSV AYQKMLGMTL PRTVQEQQAL GKPVARDKLR KGDLVFFKTG WSTHHVGIYV 
GENNFLHVST SQGVKISSLL NSYWASKYWN ARRI