| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0059 |
|---|
| Symbol | kdpE |
|---|
| ID | 1167958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 66406 |
|---|
| End bp | 67095 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637342073 |
|---|
| Product | transcriptional regulatory protein KdpE |
|---|
| Protein accession | NP_715701 |
|---|
| Protein GI | 24371659 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACA AGGTGTTAGT GGTTGATGAC GAACCCCAAA TCCACACGTT TATGCGCATC
TCACTCGAGG CAGAAGGCTT TGAATACTTA AGTGCCACCA GCATTGGTTC GGCACTCAAG
CAATATCGTA GCCATCAGCC GCACCTTATC GTGCTCGACC TCGGCTTGCC CGACGGCGAT
GGCATTGAGT TACTTCACAT GCTGCGCCAG CAAGATAAAA CCCCTGTGTT GGTTTTAACC
GCCCGCGATC AAGAGGAAGA AAAAATCCGT CTACTTGAGG CTGGCGCTAA CGATTACCTC
AGCAAACCCT TTGGCATTAG GGAATTAATT GTCCGCATTA AGGTATTGAT GCGCGACCTT
GTTGATACCT CAATTGCTGC GGATGTGTTG CAATTTGGCC CGCTTAAATT GCAAAAGAGC
AGCCACCAAT GCTGGCTCAA CCAACAGGAA ATCGCCCTCA CCAAAAAGGA ATTTGCCCTG
TTAGCACACT TAATGTCCCA TCCGGGGCAA CTGGTAAAAC AGAGCGAACT GTTGCGGCGT
ATCTGGGGGG AGACTCACCA AGAAGATGGC CACTATCTGC GGATTTTAGT CAGCCAACTG
CGTAAAAAAC TCAACGACAG TGACGAACAA CAACTGATCA AAACCGAGCC AGGCTTAGGG
TATCGACTCA CCGATCTCGG TCTTCCCTAG
|
|---|
| Protein sequence | MAYKVLVVDD EPQIHTFMRI SLEAEGFEYL SATSIGSALK QYRSHQPHLI VLDLGLPDGD
GIELLHMLRQ QDKTPVLVLT ARDQEEEKIR LLEAGANDYL SKPFGIRELI VRIKVLMRDL
VDTSIAADVL QFGPLKLQKS SHQCWLNQQE IALTKKEFAL LAHLMSHPGQ LVKQSELLRR
IWGETHQEDG HYLRILVSQL RKKLNDSDEQ QLIKTEPGLG YRLTDLGLP
|
|---|
| |