| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0056 |
|---|
| Symbol | |
|---|
| ID | 1167955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 63429 |
|---|
| End bp | 64187 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637342070 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | NP_715698 |
|---|
| Protein GI | 24371656 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATTA AATTTTTGAA AAAAATGCTT ATTTGTCTAC TGGGAGCCGC CAGTCCGCTT
GCGGCAGAGC CTCTGGTCAT TGGTGCCGAA GATGACTGGG CTCCCTATTG CGCTCTGGAT
AAGCAGAGTG GACAACCTCT CGGCCTGGCT CCGGAGCTGG TCAAGGCGGT ATTTGCTACC
GAGAAACTCG AGATTGCTTT TCGTCCTCTT CCCTTCGCCC GTTGTATGCA CGATGCGAAA
AGCGGCAAAG TTGTGGGTTG TTTCAACGCG ACCATTACCG AAGAAAATCG CAACCAGTAC
TATTGGCATA AAACCCCGAT GTTTGAAGAG GATCTTGCCA TCTTCGCTCT TGCTAGCGAG
CCGAACCGAG ATCTCCAACT CTCCTCGCTA GAGGGGAAGA GGGTTGGGAT TACTCTGGGT
TACACCTATC CCACCGATTT TATGGATAAC ACTAAGATCA CCCGTTTTGA GGCTAAATCG
GATGCTCAGA TCCTCGAAAT GCTGGTGCGT GGCCGAGTCG ACTACATTCT GATGAATGGT
ATGCCGGGTT ACCTGCAGAT CCAGCAGAGG CAACTGACTG GCAAAGTGAT CAAGGTAGGA
AAGATCTCAA CCGATGGCTT TTGGCTCGCC TTTTCCCGCA CTCATCCACA GGGTGAAGCG
ATGTCCAAAC AGTTCGAAGA AGGATTGCAG AAAATCAAAA ACAACGGCAC CTATGAACTA
TTAATACGAG ATTTCGAGGC CAAACTCGGA CTGCGTTGA
|
|---|
| Protein sequence | MVIKFLKKML ICLLGAASPL AAEPLVIGAE DDWAPYCALD KQSGQPLGLA PELVKAVFAT
EKLEIAFRPL PFARCMHDAK SGKVVGCFNA TITEENRNQY YWHKTPMFEE DLAIFALASE
PNRDLQLSSL EGKRVGITLG YTYPTDFMDN TKITRFEAKS DAQILEMLVR GRVDYILMNG
MPGYLQIQQR QLTGKVIKVG KISTDGFWLA FSRTHPQGEA MSKQFEEGLQ KIKNNGTYEL
LIRDFEAKLG LR
|
|---|
| |