Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0053 |
Symbol | gpsA |
ID | 1167952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 58583 |
End bp | 59599 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637342067 |
Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
Protein accession | NP_715695 |
Protein GI | 24371653 |
COG category | [C] Energy production and conversion |
COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACT CTGCCGATAT CACGGTATTA GGGGCGGGCT CATATGGCAC CGCCCTTGCC ATCTCTTTAG CCAGCAATGG TCATAAGACC TTGTTGTGGG GGCACGATCC TGCCCATATG CAGACTCTTG CAGAGGATAA ATGCAACCAA GCATTCTTGC CTGGTATTGC TTTTCCCGAG TGTTTACATA TCGAAGCCGA TTTAGCCAAA GCCTTAGCCG CCAGCAATAA CGTGCTGGTT GTCGTGCCTA GCCATGTGTT TGGCACGGTA CTGGCCCAAG CCAAACCTTT GTTGCGCCAA GATGCACGCA TCGTATGGGC GACCAAAGGG CTCGAGCCTG AAACCGGACG TTTGCTGCAA GATGTGGCCC GTGATGTGTT AGGCGAGCAA TATCCGCTGG CGGTATTGTC TGGGCCAACC TTTGCGAAGG AATTAGCCAT GGGTTTACCT ACGGCGATTT CAGTTGCAGG CACTTGTCCT CAATTTACCG CTGAGTTAGT GGAATTGCTG CACAGCCCTA AACGTTTACG GGTTTACGCC AACGACGACT TTATCGGCCT GCAATTAGGC GGCGCGGTAA AGAACGTTAT CGCGATTGGC GCGGGGATGT CTGACGGTAT TGGCTTTGGT GCCAACGCCA GAACGGCTTT AATCACCCGC GGTTTAGTCG AGTTAACCCG CTTAGGCGAA GCCTTAGGCG CCAGCACCGC TACCTTTATG GGCATGGCTG GATTAGGTGA CCTAGTGCTG ACTTGTACCG ACAACCAATC CCGTAACCGC CGCTTTGGTT TAGCCTTAGG TAAAGGCTGC GATGTGGATA CCGCCCAGGT TGAAATTGGC CAAGTGGTTG AGGGTTATCG CAATACTAAA GAAGTGTTTA CGCTAGCCAA ACGTCTTGGT GTTGAAATGC CGATCACTGA GCAGATTTAC CAAGTTTTGT ATCAAGGTAA ATCACCAGTT GATGCCGCAA AAGAACTGCT CGGTAGAGAG AAGAAATCAG AAACGCCTAC GCAATAA
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Protein sequence | MNNSADITVL GAGSYGTALA ISLASNGHKT LLWGHDPAHM QTLAEDKCNQ AFLPGIAFPE CLHIEADLAK ALAASNNVLV VVPSHVFGTV LAQAKPLLRQ DARIVWATKG LEPETGRLLQ DVARDVLGEQ YPLAVLSGPT FAKELAMGLP TAISVAGTCP QFTAELVELL HSPKRLRVYA NDDFIGLQLG GAVKNVIAIG AGMSDGIGFG ANARTALITR GLVELTRLGE ALGASTATFM GMAGLGDLVL TCTDNQSRNR RFGLALGKGC DVDTAQVEIG QVVEGYRNTK EVFTLAKRLG VEMPITEQIY QVLYQGKSPV DAAKELLGRE KKSETPTQ
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