Gene SO_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0048 
Symbol 
ID1167947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp54456 
End bp55490 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content47% 
IMG OID637342062 
ProductM24/M37 family peptidase 
Protein accessionNP_715690 
Protein GI24371648 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATCCA TCCAAGCGCA AATCAACCAA CAACAAAGCG CGCTTAAAAA CACCAGTAAA 
CAGCGGGAAA AGTTACTCGC ATTGCTACGT AGCGATGAAG AAGCGATTGC AGCCGCCGCC
AAAAAGGTCA ATAGCACCAA AACCAGTTTG GCGCAGATTG ATAATACGCT TGCCGAACTC
AAACAACGCC AAGAAGAGTT AGAAAGTCTT AAGGTTAGCC AGCAAAATAC GCTTTCAAAA
CAACTTTCGA GCGCCTATCT AGCCGGTAAC CACGATTACA CTAAGATGAT GCTGAACCAG
CAGAGTCCCG CCACCATTGA GCGGATGTTG GCCTATTACC AATATCTCAA CAAAGCGCGG
ATGAAATCGA TTAACGAGTT AAAACAAACA ATCACTGAGC TTGATGAGAT TAAAGTAACC
CAAACCAGCA AGCAAAAACA ATTGACTACC TTGATGGCCG AGCAACAAGT GCAATCTAAG
CGCTTGAATC AAGAACAAGA TCAACGTCAG TTAACCCTCA ATGAATTACA GCGAACCTTA
AACACTAAAG GTGCTGAACT CGAACAACTG CAAATCGAGG AAGCCAGCTT AAAACGGGTT
GTTGAACAAG CACTAAAGGC GATGCGTGAC AATCCTTCGA TGGAAGGCTT TGATAAACAA
GGCGGCAAAC TTAAATGGCC GACCAAAGGC CGCGTTAGTG CCAGCTTTGG TAGCCCCAGA
TCCGGCCAAG TGGTGTGGAA AGGCACCATG TTATCCGCGC CCGAAGGGCA AAATATCCGC
GCGGTTTCCG GTGGTAAAGT GATCTATGCC GACTGGCTAA AAGGCTTTGG TATGGTGATG
GTGATCGACC ATGGCAAAGG CTACATGAGC CTCTATGGCC ATGCGCAGAC CCTGTTAAAA
AGCCCCGGAG AAATGGTAAA AACCGGTGAA GCGATAGCTT TAGTCGGACG TTCGGGTGGA
CAGACTGAGC CTGGCCTATA CTTTGAAATA AGATATAAGG GGCAAGCCGT CGATCCAGCC
AAGTACTGTC GCTAA
 
Protein sequence
MKSIQAQINQ QQSALKNTSK QREKLLALLR SDEEAIAAAA KKVNSTKTSL AQIDNTLAEL 
KQRQEELESL KVSQQNTLSK QLSSAYLAGN HDYTKMMLNQ QSPATIERML AYYQYLNKAR
MKSINELKQT ITELDEIKVT QTSKQKQLTT LMAEQQVQSK RLNQEQDQRQ LTLNELQRTL
NTKGAELEQL QIEEASLKRV VEQALKAMRD NPSMEGFDKQ GGKLKWPTKG RVSASFGSPR
SGQVVWKGTM LSAPEGQNIR AVSGGKVIYA DWLKGFGMVM VIDHGKGYMS LYGHAQTLLK
SPGEMVKTGE AIALVGRSGG QTEPGLYFEI RYKGQAVDPA KYCR