Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0047 |
Symbol | |
ID | 1167946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 53199 |
End bp | 54407 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342061 |
Product | carboxyl-terminal protease, putative |
Protein accession | NP_715689 |
Protein GI | 24371647 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATC TACTCCGCAA TATCGCCAGT CTTGGACTCG GCCTAAGCTT AGGCCTGTCT ATTAGCCTAT CCAGTCAAGA GAATACCAAG TCGTATCGAA GTGACTTTGA TTACCCGCTA TTGCAGGATG TGCTCGAAAC GGTCGAAACC TATTACGTTA AAACTGTGAC TAAGGATGAG CTTGTTCAAG CGGCAATTAA AGGCATCTTT GAGCATTTAG ATCCCTATTC AAGCTTTCTA AATCACCAAG AATTACTCGA TCTAAAAGAT TCAAATCGGG GTGAGTACTT CGGCTTTGGC TTTGAAGTCG CCAGCGAAAA AGACCATATC AGCATCATTG CCCCCTTTGC GAACTCCCCA GCCGAACAGG CTGGGATTCA AGCCGGTGAC ATCATTATCA AGCTGAATAA CACCCCCACG ACAGAAACTA ACCTTGCGGA TATTCTTAAC CAAATCAAGC AACACAGTTT GAGTCATCAA AGTATTCGCC TCACGCTAAA ACACCGTAAT GACGAAGCAG AATTTGAGGT GATGTTAAAA CCTAGCACAA TCACAATTCA GTCGGTCGCG AGCAAATTAT TGGATGGGAA CATTGGCTAC GTAAGGCTCA GCAGCTTTCA AGAAGACTCT ACCGAAGATA TGGTACGCAC CCTGAGCCAA TGGCAAGGCA CTCAGTTAAC GGGCTTGATA TTGGACCTAC GCAATAATCC CGGCGGCCTG CTCGATCAGG CAATTAATAT TGCCGACCTC TTTTTGGCAA AAGGGCGAAT CGTCTCCACC TCTGGCCGTT TTTTTGATGC CAATTCAGAC TATTACGCCT CACCGCAAAC CATGCTCGCC AACGTACCCA TGCTAGTGCT AATCAATAAA GGCTCCGCAT CAGCATCAGA AGTACTGGCC GCCGCATTGC AAGAAAATGG CCGGGCAAAA CTCCTAGGCG AAACCAGCTT TGGTAAAGGA ACAGTGCAAA GCCTTATTCC TATTCTTAAC AACGGCAATG CGGTCAAACT GACCATAGCC CAGTACAACA CGCCTAAAGG GGAGAATATC CACGACATAG GGATTAAGCC CGACATCAAA GTAGTCTCCG AAACTGGCTC CAATCAAAAG AATATGCCTA TAATCGACGC TATCTCTGCA CGAACCGATG TCAGCCAAGA CACGATTGTC ACTTCAGCTA TCACTTGGAT GCAACATCAT GACGAATAA
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Protein sequence | MKHLLRNIAS LGLGLSLGLS ISLSSQENTK SYRSDFDYPL LQDVLETVET YYVKTVTKDE LVQAAIKGIF EHLDPYSSFL NHQELLDLKD SNRGEYFGFG FEVASEKDHI SIIAPFANSP AEQAGIQAGD IIIKLNNTPT TETNLADILN QIKQHSLSHQ SIRLTLKHRN DEAEFEVMLK PSTITIQSVA SKLLDGNIGY VRLSSFQEDS TEDMVRTLSQ WQGTQLTGLI LDLRNNPGGL LDQAINIADL FLAKGRIVST SGRFFDANSD YYASPQTMLA NVPMLVLINK GSASASEVLA AALQENGRAK LLGETSFGKG TVQSLIPILN NGNAVKLTIA QYNTPKGENI HDIGIKPDIK VVSETGSNQK NMPIIDAISA RTDVSQDTIV TSAITWMQHH DE
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