Gene SO_0042 details

Gene Information

• Locus tag: SO_0042
• ID: 1167940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 44973
• End bp: 45521
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637342051
• Product: carbonic anhydrase
• Protein accession: NP_715684
• Protein GI: 24371642
• COG category: [R] General function prediction only
• COG ID: [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGGC CACTCAGAAC TTACCAAGGA ATTCATCCAC AACTCGGCGA TAATGTGTAT 
GTGGACGCAG CTTCAGTGCT CGTTGGTGAT ATTGCGTTAG ATACAGACGC TAGCATTTGG 
CCCATGGTTG CAGCTCGTGG GGATGTTAAT CATATTCGAA TTGGTAAACG CTCGAATGTG 
CAGGATGGCA GTATATTGCA TGTGACCCGT AAGTCAGCCT CTCGCCCTGA AGGTCACCCT 
CTGATTATTG GTGATGATGT GACTATTGGA CATAAGGCAA TGCTGCATGG CTGCAAGGTT 
GGTAATCGTG TTTTAGTGGG GATGGGGGCG ATTATTCTTG ACGGTGCGAT TTTAGAAGAT 
GATGTGATCT TAGGTGCAGG GTCGTTAGTG CCGCCGGGTA AAGTATTAGA AAGTGGCTAT 
TTATATGTGG GAAGCCCCGC GAAACAGGCG AGACCTTTAA CAGAAGCTGA ATTGAAGTTT 
TTACCCGAAT CAGCGGATAA CTATGTACGT TTAAAAAATG AATACTTAGC AGAGCCTCAG 
CCGAACTAA 

 

Protein sequence

MAGPLRTYQG IHPQLGDNVY VDAASVLVGD IALDTDASIW PMVAARGDVN HIRIGKRSNV 
QDGSILHVTR KSASRPEGHP LIIGDDVTIG HKAMLHGCKV GNRVLVGMGA IILDGAILED 
DVILGAGSLV PPGKVLESGY LYVGSPAKQA RPLTEAELKF LPESADNYVR LKNEYLAEPQ 
PN