| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0040 |
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| Symbol | aroE |
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| ID | 1167938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 43717 |
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| End bp | 44580 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342049 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | NP_715682 |
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| Protein GI | 24371640 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGTTA CATCCCCAAT AGTTGATCGC TATGCCGTAT TTGGTCATCC AATCGGCCAC
AGTAAATCCC CCTTTATTCA TGGCCAGTTT GCGGCCTTAA CACAGGAATC TTTGACCTAT
GAAGCGATTC TGGCGCCTAT TGATGGTTTT GAAGCTAGCT TAAAAAGCTT TTTCAGTAGC
GGAGGTAAAG GTGCCAATGT GACAGTTCCC TTTAAAGAAC AAGCTTTTGC TCTATGTGAT
AGTTTAAGTG CTGAGGCTGC ACTAGCAGGT GCTGTTAATA CCTTAAGCCT GTTGGCTGAT
GGTTCGATCC GTGGCGATAA CACCGATGGT TTAGGGTTAG TTGCCGACCT TATAAGTCAC
CTGGGCAGTT TGCAGCATAA GCGAGTCTTA TTAGTTGGTG CAGGCGGCGC GGCGCGTGGA
TGTATCTTGC CTCTGCTCAA CGCCGGAGTT GGCCAGTTGG TTATCACAAA TCGCACCCAA
ACTAAGGCTA AGGATTTAGT GGATATTTTT AGCCAATTAG AAGAGGGGAT TTACAAAGAT
AAACTTCAAG CTTTATCTAT GTCTGAGCTT ACGGGGGAGT TTGAATTAGT GATCAACTCA
ACCTCGGCCA GTCTTGCAGG TGAATTACCA CCCTTGCCCC AATCAATTAT CGGTAGCACT
ACCGTTTGCT ACGATATGAT GTATGGCGCA ATGCCTACGG CATTTAACCA ATGGGCATTA
CAGCAGGGGG CTGCTAAGGT GATTGATGGG CTTGGAATGC TTGTCGGCCA AGCAGCTAAG
AGCTTTGCGC TCTGGCGCAC TGTCGAGCCT GACACCGCTG TCGTGCTTAA ACTGCTCAGG
GAAAAACTAC AGTTGGACAT CTAA
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| Protein sequence | MTVTSPIVDR YAVFGHPIGH SKSPFIHGQF AALTQESLTY EAILAPIDGF EASLKSFFSS
GGKGANVTVP FKEQAFALCD SLSAEAALAG AVNTLSLLAD GSIRGDNTDG LGLVADLISH
LGSLQHKRVL LVGAGGAARG CILPLLNAGV GQLVITNRTQ TKAKDLVDIF SQLEEGIYKD
KLQALSMSEL TGEFELVINS TSASLAGELP PLPQSIIGST TVCYDMMYGA MPTAFNQWAL
QQGAAKVIDG LGMLVGQAAK SFALWRTVEP DTAVVLKLLR EKLQLDI
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