Gene SO_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0038 
SymbolhemF 
ID1167936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp42152 
End bp43060 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content51% 
IMG OID637342047 
Productcoproporphyrinogen III oxidase 
Protein accessionNP_715680 
Protein GI24371638 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTGC CTGATGCGAC AGTAGTAAAA GCATTCTTAC TCGATCTGCA ACATCGAATT 
TGTGCGGGTC TTGAGCAGTT GGATGGGCAA GCAAGCTTTG CTGCTGATTC ATGGACTCGC
GCCGAGGGTG GTGGTGGCAC GAGTCGTGTC TTAACCCAAG GTGCCGTATT CGAGCAAGCT
GGGGTTAACT TTTCCCATGT GACGGGGGCG GCGATGCCCG CATCGGCGAC GGCGCATCGC
CCTGAGTTGG CGGGGCGCAG TTTTGAGGCG ATGGGCGTTT CGTTAGTGAT TCACCCAAAA
AATCCTTATA TTCCGACCAC CCATGCCAAC GTGCGCTTTT TTATTGCCCA TAAAGACGGC
GCTGAGCCTG TATGGTGGTT TGGCGGTGGT TTCGACTTAA CGCCTTATTA TCCTTTTGAA
GAAGATGTGC GCGAGTGGCA TCAAAGTGCT AAAAATCTGT GCCAGCCTTT TGGTGACGAT
GTTTACCCTA AATATAAGAA ATGGTGTGAT GAGTATTTCT TTTTGCCACA CCGTAACGAA
ACCCGTGGCG TGGGCGGACT GTTCTTCGAT GATTTGAATC AAGCAGGCTT CGATAAAAGT
TTCGACTTTA TGCAGGCGGT CGGGAATGGC TTCTTAACGG CTTATGCGCC GATTGTTGAG
CGCCGTAAGG ATACTGATTA TGGCGAGCGT GAACGTGATT TTCAATTGTA TCGCCGTGGT
CGTTATGTTG AGTTCAATCT TGTGTATGAC CGAGGCACCT TGTTTGGCCT GCAAACGGGT
GGTCGCACTG AATCAATCTT AATGTCAATG CCGCCATTAG TGCGTTGGCA GTATGCCTAT
ACGCCTGCGG CGGGTAGCCC TGAGGCAGAT CTGTACGATA ACTACCTCAA ACCTCGCGAC
TGGGTGTAG
 
Protein sequence
MSLPDATVVK AFLLDLQHRI CAGLEQLDGQ ASFAADSWTR AEGGGGTSRV LTQGAVFEQA 
GVNFSHVTGA AMPASATAHR PELAGRSFEA MGVSLVIHPK NPYIPTTHAN VRFFIAHKDG
AEPVWWFGGG FDLTPYYPFE EDVREWHQSA KNLCQPFGDD VYPKYKKWCD EYFFLPHRNE
TRGVGGLFFD DLNQAGFDKS FDFMQAVGNG FLTAYAPIVE RRKDTDYGER ERDFQLYRRG
RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWQYAY TPAAGSPEAD LYDNYLKPRD
WV