Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0030 |
Symbol | sun |
ID | 1167928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 35131 |
End bp | 36417 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637342039 |
Product | sun protein |
Protein accession | NP_715672 |
Protein GI | 24371630 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTGC GTGCACTGGC AGCTAAAGCC ATCTTCGATG TATTAGAAAA AGGCGTATCG CTTTCTGTTG CCCTGCCAGA ACAGCAAAAA CACCTTGCCA GCGGCAAAGA TAAGGCCCTG CTGGCTGAGC TCTGCTATGG CGTGATGCGC ACTTTACCGC AGATAGAAAA ACGCACCGCT GAGTGTTTAG CCAAACCGCT CAAAGGCAAA CAAAGGATTA TCCACCAGCT GTTGATTGTG GGCTGCTATC AGCTATATTT TACCCGTATT CCGAGCCACG CGGCCATATC CGAAACCGCT GAAGCCTGCC GTCAGCTAAA GTTTGAAGGC ATGGTCAAAG TGGTCAATGG CGTGCTGCGA AATATTCAAC GTCAATTAAC GCCGCTGAGT AATGAGTCTG AAACCTTAAG CTACAACACG CCGGGTTGGT TAATTAAACG CTTAAAAACC GCTTACCCAG GCAACTGGCA AGAGATTATC CAGCAAAGTC ATGAACGTCC CCCCATGTGG CTGCGTAACA ACCGCCTCTC CCAAAGCCGC GACGAATACC TTGCGGCCTT GGATAAGCTT GAGATAGATG CCAGCGCGGG ATTGAGTGAT GATGCAATCC TGCTTGCCGC CCCCAAAGAC GTTGCAACAT TACCGCTCTT CCTTGAAGGG GCTGCCTCGG TACAAGATGG TGCAGCCCAA TGGGCAGCAA CCCTACTTGC CCCCCAAGCC AATGAACTGA TCCTTGATGC CTGCGCAGCG CCCGGTGGTA AAAGTTGCCA TTTGCTGGAA CTTGAACCTA GCATTAAGCT CATCGCCGTC GATTTTGATG CGAAACGTCT CGAACGCGTA CAACAGAACC TTGACCGTTT GTCATTAAAA GCGGAAGTTA TTCATGGAGA TGCGGCCAAT ATCGACTCAT GGTGGCAGGG CGAACAATTT GATCGTATCT TACTCGACGC ACCTTGCTCG GCGACGGGAG TAATCCGCCG TCATCCCGAT ATCAAATGGT TACGTAAAAA CCATGACATA GAAGAGCTGG CTGAACTACA AAGACAAATT TTGGATCACT GCTGGAAGTG GCTCAAACCC GGTGGCACAC TTCTGTATGC GACTTGCTCC ATTTTGCCGC AGGAAAATCG AGACCAAATT AGTGCATTTT TAGCCAGAAC CGCAGATGCT AAACTAGATA CACTCGTCCA GCAGGCCTCA AGCCAAGATA TAGGTTGGCA AATCACGCCG GGACAACACA ACATGGATGG GTTTTATTAC GCCCGTTTAT TGAAAGCGAC CCATTAG
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Protein sequence | MNLRALAAKA IFDVLEKGVS LSVALPEQQK HLASGKDKAL LAELCYGVMR TLPQIEKRTA ECLAKPLKGK QRIIHQLLIV GCYQLYFTRI PSHAAISETA EACRQLKFEG MVKVVNGVLR NIQRQLTPLS NESETLSYNT PGWLIKRLKT AYPGNWQEII QQSHERPPMW LRNNRLSQSR DEYLAALDKL EIDASAGLSD DAILLAAPKD VATLPLFLEG AASVQDGAAQ WAATLLAPQA NELILDACAA PGGKSCHLLE LEPSIKLIAV DFDAKRLERV QQNLDRLSLK AEVIHGDAAN IDSWWQGEQF DRILLDAPCS ATGVIRRHPD IKWLRKNHDI EELAELQRQI LDHCWKWLKP GGTLLYATCS ILPQENRDQI SAFLARTADA KLDTLVQQAS SQDIGWQITP GQHNMDGFYY ARLLKATH
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