Gene SO_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0023 
Symbol 
ID1167921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp28404 
End bp29018 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID637342032 
Producthypothetical protein 
Protein accessionNP_715665 
Protein GI24371623 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAAA GTTATCTGAT ACCGAGTGAA GATCTACAGA TAGAAGAAGA GATAAAGTAC 
AGCCGCTTTA TCTCTTTTCT ATTTCACTGC AATAGTTTAG AACAATTAAA GTTAGTACTT 
ACTGACATCA AGCGAGATTA TCCCGGCGCC AGCCATTATT GTTATGCCTT TATCGCGGGA 
GCGCCCAACG ACAGCATGTT AATTGGTTCA AGTGATGATG GTGAGCCTGC TGGCAGCGCG 
GGTCGTCCCA TGTTAGCGGT ATTGCAAGGC GCAAGTATTG GCGAGATCGG TGCTGTCGTG 
GTGCGTTACT ACGGTGGCAC TAAACTGGGC GTTGGGGGCT TAGTGCGTGC CTATACCTCT 
GGATTACGCC AAGGCTTGGC GCAATTACCG ACTCAATTGA AGCAATTACG TTATCCGGCA 
ACGCTGCGTT GTGATTACAC TCAATTACGG AATGTTGAGC ATTTATTGCA GCAGTTGGAT 
GCAGTGATTA CCGATAAACA GTTTGCTGAG GCTGTAGATA TCCATTTTGC TATTGGTAAA 
CAACAACAGC GGTTATTGAC AGAATCCTTG GCTACCTTAA GCCAAGGGAG CTTGCGGGCA 
GACTTTAAAC TGTGA
 
Protein sequence
MLESYLIPSE DLQIEEEIKY SRFISFLFHC NSLEQLKLVL TDIKRDYPGA SHYCYAFIAG 
APNDSMLIGS SDDGEPAGSA GRPMLAVLQG ASIGEIGAVV VRYYGGTKLG VGGLVRAYTS 
GLRQGLAQLP TQLKQLRYPA TLRCDYTQLR NVEHLLQQLD AVITDKQFAE AVDIHFAIGK 
QQQRLLTESL ATLSQGSLRA DFKL