Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0022 |
Symbol | pepQ |
ID | 1167920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 27069 |
End bp | 28388 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637342031 |
Product | proline dipeptidase |
Protein accession | NP_715664 |
Protein GI | 24371622 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACT TGGCTCATTA CTATCATGCC CACATCGACG AGTTAAATCG TCGAGTCGCT GAAATTGTAT CGCGTGAAGC ATTATCAGGT TTAGTGATCC ACTCGGGTCA GCCACACAGA ATGTTTTTGG ATGACATTAA TTATCCTTTT AAAGCCAACC CTCATTTTAA GGCGTGGTTA CCTGTGTTGG ATAATCCCAA CTGCTGGTTG GTGGTGAATG GTCGCGATAA GCCACAACTG ATCTTTTATC GCCCGGTGGA TTTTTGGCAT AAGGTTGCCG ACGTACCGGA TATGTTCTGG ACCGAGCATT TTGACATCAA GTTGCTCACT AAGGCCGATA AAGTCGCCGA ATTATTGCCT ACCGATATCG CCAACTGGGC TTATTTGGGT GAGCATTTAG ATGTGGCTGA GGTGCTTGGG TTTACTAGTC GTAATCCTGA TTCGGTGATG AGTTATCTGC ATTTTCATCG CACCACAAAA ACCGAATATG AACTTGAATG TATGCGCCGT GCCAACCAAA TTGCAGTACA AGGTCATCAG GCGGCTAAAA ATGCCTTTTA TAATGGCGCG AGCGAGTTTG AAATTCAGCA GCAGTATTTA TCCGCTGTGG GACAGGGTGA GAACGAAGTG CCCTATGGCA ATATTATTGC CCTAAACCAA AATGCGGCGA TTTTGCATTA CACCGCGCTT GAGCATCAAA ATCCTGCGCG CCGTTTGTCA TTCTTAATTG ATGCAGGTGC CAGTTATTTT GGCTATGCAT CAGATATCAC TCGTACCTAT GCGTTCGAGA AGAATCGTTT CGATGAGTTG ATCACTGCTA TGAACAAAGC GCAGCTTGAG CTGATTGATA TGATGCGCCC AGGAGTGCGT TATCCCGATT TACATTTAGC GACCCATGGC AAAGTGGCGC AAATGCTATT GGATTTTGAC TTGGCAACAG GCGATGCTCA AGGGTTAGTC GAGCAAGGCA TTACCAGCGC CTTCTTCCCC CACGGATTGG GCCATATGTT AGGCTTGCAA GTGCATGATG TTGGCGGCTT CGCCTTTGAT GAGCGTGGCA CCCATATTCC TGCCCCTGAG GCGCATCCAT TTTTGCGTTG CACGCGCATT TTAGCGCCAA ACCAAGTGCT AACTATGGAG CCAGGTTTGT ACATTATCGA CTCCTTACTC AATGAGTTAA AACAAAATAG CCGTGGCAAG CAGATCAATT GGAACAGCGT TGATGAGCTG CGACCTTTCG GCGGTATTCG TATTGAGGAT AATGTGGTTG TGCATCAGGA TAGAAATGAG AATATGACCC GCGAACTGGG CTTAGCGTGA
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Protein sequence | MDHLAHYYHA HIDELNRRVA EIVSREALSG LVIHSGQPHR MFLDDINYPF KANPHFKAWL PVLDNPNCWL VVNGRDKPQL IFYRPVDFWH KVADVPDMFW TEHFDIKLLT KADKVAELLP TDIANWAYLG EHLDVAEVLG FTSRNPDSVM SYLHFHRTTK TEYELECMRR ANQIAVQGHQ AAKNAFYNGA SEFEIQQQYL SAVGQGENEV PYGNIIALNQ NAAILHYTAL EHQNPARRLS FLIDAGASYF GYASDITRTY AFEKNRFDEL ITAMNKAQLE LIDMMRPGVR YPDLHLATHG KVAQMLLDFD LATGDAQGLV EQGITSAFFP HGLGHMLGLQ VHDVGGFAFD ERGTHIPAPE AHPFLRCTRI LAPNQVLTME PGLYIIDSLL NELKQNSRGK QINWNSVDEL RPFGGIRIED NVVVHQDRNE NMTRELGLA
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