Gene SO_0016 details

Gene Information

• Locus tag: SO_0016
• Symbol: tag
• ID: 1167914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 18279
• End bp: 18854
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637342025
• Product: DNA-3-methyladenine glycosidase I
• Protein accession: NP_715658
• Protein GI: 24371616
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAA TCCGCTGTAA TTGGGTTAGT GATGATCCCT TGTATCGCGA TTATCACGAT 
AATGTATGGG GGCGCCCAGT TTATGATCCC AAGGAGTTAT TTGCCAAGCT CTGCTTAGAT 
GGCCAGCAAG CGGGGTTATC TTGGATTACG ATCTTAAAGA AACAACAAAA TTATGAGCAA 
GCTTTTGCCG ATTTTGAGCC TGCAGTGATT GCTACTTTCG ATGATGCTAA AGTTGAGGAG 
TTGATGGCCA ATCCTGGTAT TGTGCGCAAT CGACTCAAGA TCCATTCAAT TATTCGTAAT 
GCAAAAGGGT ATTTAGCATA TACGGCCGAT GGTGAGGATT TTTCTGCGTT TCTGTGGAGT 
TTTGTTGGCG GTAAACCGCG AGTGAATCAA TTTACGTCTA TGTCACAGAT CCCTGCGCAA 
ACGCCGGAAT CAGAGGCCAT GTCAAAGGCG TTAAAAAAAC TTGGCTTTAA CTTTGTTGGC 
CCGACGATTT GTTATGCCTT TATGCAGGCA GTGGGTATGG TGAATGATCA CCTTGTTGAT 
TGCGTTGCTT ATGATGCTTG CTGTGGCGGT AAATAA 

 

Protein sequence

MEEIRCNWVS DDPLYRDYHD NVWGRPVYDP KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ 
AFADFEPAVI ATFDDAKVEE LMANPGIVRN RLKIHSIIRN AKGYLAYTAD GEDFSAFLWS 
FVGGKPRVNQ FTSMSQIPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVD 
CVAYDACCGG K