| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0011 |
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| Symbol | gyrB |
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| ID | 1167909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 10638 |
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| End bp | 13055 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342020 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | NP_715653 |
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| Protein GI | 24371611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAGA ATAGTTACGA TTCTTCGAGT ATTAAGGTCC TTAAGGGCCT TGATGCAGTA
CGTAAGAGAC CTGGGATGTA TATTGGTGAC ACCGACGACG GTACGGGTCT ACATCATATG
GTGTTCGAAG TAGTCGATAA CTCTATCGAT GAAGCCTTAG CGGGCCATTG TACTGATATC
ACAATTACTA TCCATGTGGA TGGTTCGGTT TCTGTTAAGG ATGATGGCCG TGGTATTCCG
GTCTCTATCC ATGAAGAAGA AGGCGTATCT GCAGCAGAAG TTATCATGAC GGTACTGCAC
GCTGGCGGTA AGTTCGACGA TAACTCCTAT AAAGTGTCAG GTGGTCTGCA CGGCGTGGGG
GTGTCGGTGG TAAACGCACT TTCTAAAAAA CTGCAATTAA CCATTCGCCG TGATGGCAAA
GTCCACGAGC AGTTTTACAC CCATGGCGTT CCTGATGCGC CAATCAAAGA GATTGGTGAT
GCAACTAAAA CTGGAACCGA AATTCGTTTT TGGCCAAGTG AACAAACTTT CAGTAATGTT
GAGTTTCACT TTGAAATTCT GGCTAAACGC GTGCGTGAAC TGTCGTTCCT CAACTCTGGC
GTGGGTATTC GCTTAGTTGA CGAGCGTGAT AATAAAAATG AATTCTTCAA ATACGAAGGT
GGTATCAGCG CGTTCGTCGA TTATCTGAAC CGCAACAAAA CCCCAGTAAA CAAAGATGTA
TTCCATTTTA TGCAAGAGCG TGACGACGGT ATCACCGTTG AAGTGGCGAT GCAGTGGAAC
GACGGCTACC AAGAAAATAT TTTCTGTTTT ACCAACAACA TTCCACAGCG TGATGGTGGT
ACTCACTTAG CGGGTTTCCG TAGTGCGTTG ACACGTAACC TCAACAACTA CATGGAAAAC
GAAGGTTATA ACAAGAAAGG CAAAACCAAC GCGACTGGCG ATGATGCCCG CGAAGGCTTA
ACTGCGGTCA TTTCAGTTAA AGTGCCTGAT CCTAAGTTCA GCTCGCAAAC CAAAGATAAG
CTGGTGTCTA GCGAAGTGAA AGCTGCGGTT GAGCAGACCA TGGGTGAGAA ACTAAACGAC
TACCTATTGG AAAACCCTGC CGATGCTAAG TTAATCGTTG GTAAGATTGT CGATGCTGCC
CGTGCCCGTG AAGCGGCGCG TAAAGCCCGT GAAATGACCC GTCGTAAAGG CGCACTCGAT
TTAGGTGGTT TGCCAGGAAA GCTGGCCGAT TGCCAAGAAA AAGACCCTGG TCTTTCAGAA
ATTTACATAG TGGAAGGGGA CTCTGCTGGC GGTAGCGCTA AGCAGGGACG TAACCGTAAG
AACCAAGCGA TTCTGCCACT TAAAGGTAAA ATCTTAAACG TTGAGAAAGC GCGTTTTGAT
AAAATGCTGT CTTCTCAGGA AGTGGCTACG CTGATCACCG CACTCGGCTG TGGTATTGGT
CGTGATGAAT ACAATCCTGA TAAGACCCGT TATCACAACA TCATCATCAT GACGGATGCC
GACGTCGACG GCTCACATAT TCGTACCTTG CTGTTGACTT TCTTCTTCCG TCAAATGCCT
GAGCTTATCG AGCGTGGTTA TGTGTATATT GCTCAGCCAC CTTTATTTAA AGTTAAAAAA
GGTAAGCAAG AACAGTATCT TAAAGATGAG TCAGCACTGA CTCAGTATCT GACAACTCAA
GCGTTAGATG GAACCAGCAT TTATCCATCT CAAGGCGCGC CTGGTATGTC GGGTGAGCCA
TTAGAGCGTT TAGTGACGCA ATACCGCGAA GTAGAAGCTA TCGTTGCGCG CCTAGAGCAA
CGTTATCCAA CGCATATCAC TAATCGGATG CTTTACCACC CAATGATCAG CAATGATATG
TTGGCCGATG AAGCTAAGAT GAAAGAATGG ATCGACGCCT TTATCCACGA GCTGGTGGAA
TTAGAAAACA GCGGCGTACT GTATTCTGGT GAGCCAGTGT TGGACCCTGA GCGTAAAGTG
TATCTGCCAA AGATCACCAT CCGTAAACAC GGTATCGACA CGCATTACTT ATTTAGCTAT
GACTTCTTCC AATCAATGGA TTATCAACGT ATTGCTAAGT TAGGTGCAGC CCTTGAAGGC
TTGATTGAAG TCGGTGGTTA TGTGCAGCGT GGCGATCGAG TGAAAGAAGT CGGCAGCTTC
ATTGAAGCGT TAGATTGGAC CATTTCTGAA GCGAAACGCG GCCTTTATAT TCAGCGTTAT
AAGGGATTGG GTGAGATGAA CCCTGAGCAA TTGTGGGAAA CCACAATGGA TCCTGAATCA
CGGCGTATGC TGCAAGTGAC CATTGATGAC GCCGTCGGCG CAGACCAATT GTTTACTTGC
TTGATGGGCG ATCAAGTAGA ACCCCGTCGT GAGTTTATTG AAGCTAACGC GCTGAACGTG
GCTAACTTAG ACGTTTAA
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| Protein sequence | MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCTDI
TITIHVDGSV SVKDDGRGIP VSIHEEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG
VSVVNALSKK LQLTIRRDGK VHEQFYTHGV PDAPIKEIGD ATKTGTEIRF WPSEQTFSNV
EFHFEILAKR VRELSFLNSG VGIRLVDERD NKNEFFKYEG GISAFVDYLN RNKTPVNKDV
FHFMQERDDG ITVEVAMQWN DGYQENIFCF TNNIPQRDGG THLAGFRSAL TRNLNNYMEN
EGYNKKGKTN ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKAAV EQTMGEKLND
YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE
IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIERGYVYI AQPPLFKVKK
GKQEQYLKDE SALTQYLTTQ ALDGTSIYPS QGAPGMSGEP LERLVTQYRE VEAIVARLEQ
RYPTHITNRM LYHPMISNDM LADEAKMKEW IDAFIHELVE LENSGVLYSG EPVLDPERKV
YLPKITIRKH GIDTHYLFSY DFFQSMDYQR IAKLGAALEG LIEVGGYVQR GDRVKEVGSF
IEALDWTISE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLQVTIDD AVGADQLFTC
LMGDQVEPRR EFIEANALNV ANLDV
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