Gene SO_0009 details

Gene Information

• Locus tag: SO_0009
• Symbol: dnaN
• ID: 1167907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 8276
• End bp: 9376
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637342018
• Product: DNA polymerase III, beta subunit
• Protein accession: NP_715651
• Protein GI: 24371609
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog)
• TIGRFAM ID: [TIGR00663] DNA polymerase III, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTT CAATTGATAG GGACGCCCTA TTAAAGCCGC TTCAATTGGT TTGTGGTGCG 
GTAGAAAGAC GCCATAACTT GCCTATTTTG GCAAATCTCC TTGTAGAAGT TAGTGGTCAC 
TCACTCAAAT TAACAGGTAC AGACCTCGAA GTTGAGTTAG TAGGTCAGGC GGTTATTCAT 
GGTGATATTG AAGAAGGTCG CACAACAGTT CCTGCAAAGA AGCTGTTAGA CATCGTAAAA 
TCCTTACCCG AGCAAAGCGA GTTAAAGGTC GAGCAACAAG ATAACAAATG GTTGTTGCGC 
TCTGGCCGTA GTCGTTTTTC GCTGGCAACA CTGCCCGCGG AAGAGTATCC GAATGTAGAA 
GCCTTCCAAG CCGAAATCGA ATTTACCCTT AAGCAAGGTG TGCTCAAGTC GCTGATTGAT 
GCGACCCAGT TTTCGATGGC TAACCAAGAC GTACGTTACT ACCTTAATGG ATTATTGATT 
GAAACCGAAG GTAATATGCT ACGCGCTATT GCAACCGACG GTCACCGTTT GGCCTTAAGT 
CATCGAGTTA TCGAAGCACA ATTACCTGAG AAGCAAGTGA TTGTACCTCG TAAAGGTGTG 
ATGGAAATGG CGCGTTTGTT GGAAACTGAT GATTTAGATA TCGCTATTTC CATTGGTGAC 
AATGCGATTC GCGCGACCAC CAGCACCACA GTCTTTACCA GTAAATTAGT CGATGGCCGC 
TTCCCTGATT ATCGCCGCGT ATTACCGAAA GGCGGTGATA AAATCGTTAT TGCTAGCCGT 
AACCACTTCA AACAAGCTTT AACGCGCGCT TCTATTTTAT CCAATGAGAA GTTTCGCGGT 
GTACGCATTC AGTTAGAAGC GGGATTACTC AAAATCACCG CCAATAACCC TGAGCAGGAA 
GAAGCGGAAG AAATCATCGA TGTGGATTAC AACAATCTGC CACTCGAAAT TGGTTTCAAC 
GTCAGCTACT TATTGGATGT ATTGAACAAC CTTAAGTCCG ATGATGTGCG TATCACTCTA 
ATCGATGGTA ACTCGAGCGC CTTGCTGGAA AACCACTTGG AAGAAGATTC CATGTATGTG 
GTTATGCCAA TGCGTTTATA G 

 

Protein sequence

MKFSIDRDAL LKPLQLVCGA VERRHNLPIL ANLLVEVSGH SLKLTGTDLE VELVGQAVIH 
GDIEEGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEEYPNVE 
AFQAEIEFTL KQGVLKSLID ATQFSMANQD VRYYLNGLLI ETEGNMLRAI ATDGHRLALS 
HRVIEAQLPE KQVIVPRKGV MEMARLLETD DLDIAISIGD NAIRATTSTT VFTSKLVDGR 
FPDYRRVLPK GGDKIVIASR NHFKQALTRA SILSNEKFRG VRIQLEAGLL KITANNPEQE 
EAEEIIDVDY NNLPLEIGFN VSYLLDVLNN LKSDDVRITL IDGNSSALLE NHLEEDSMYV 
VMPMRL