| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0002 |
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| Symbol | |
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| ID | 1167900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 954 |
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| End bp | 2504 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637342011 |
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| Product | proton/peptide symporter family protein |
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| Protein accession | NP_715644 |
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| Protein GI | 24371602 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAC CTGTTGATGC GCCAAAATGG CCACGTCAAA TCCCCTATAT TATTGCCAGT
GAAGCTTGTG AGCGTTTCAG CTTTTACGGC ATGCGCAATA TTCTAACACC TTTCTTAATG
ACGGCACTTT TGCTGTCTAT CCCTGAGGAG CTCCGCGGAG CAGTGGCAAA GGATGTGTTT
CACTCCTTTG TCATAGGTGT GTACTTTTTC CCATTACTGG GCGGTTGGAT AGCTGATCGT
TTTTTTGGTA AATACAATAC TATCTTATGG TTAAGTTTGA TTTATTGTGT TGGCCATGCT
TTCTTGGCTA TTTTTGAGCA CAGTGTGCAA GGTTTTTATA CTGGGTTATT TTTAATTGCT
TTGGGTTCTG GTGGGATAAA ACCTTTAGTC TCATCCTTTA TGGGCGATCA ATTTGATCAG
AGCAATAAGT CCTTGGCTCA AAAGGCCTTT GATATGTTCT ATTTTACGAT CAACTTTGGT
TCCTTCTTCG CATCATTATC TATGCCACTG TTACTTAAGA ACTTTGGTGC TGCCGTAGCT
TTTGGGATCC CCGGTGTGCT GATGTTTGTC GCGACGGTAT TTTTCTGGTT AGGTCGTAAG
CGTTACATAC ATATGCCGCC AGAACCAAAA GATCCCCATG GTTTTTTACC GGTGATCCGC
AGTGCATTGC TTACTAAGGT GGAAGGTAAG GGAAATATCG GTTTAGTGCT TGCACTCATC
GGTGGCGTTT CTGCGGCCTA TGCGCTGGTT AATATTCCAA CCCTTGGCAT TGTCGCAGGC
CTTTGTTGTG CCATGGTGCT AGTGATGGGG TTTGTTGGAG CGGGCGCCTC ATTACAACTT
GAACGCGCTA GAAAAAGTCA TCCAGATGCT GCGGTAGATG GTGTACGTTC AGTTCTTCGA
ATTTTGGTTT TATTTGCTTT GGTGACCCCA TTTTGGTCTC TATTCGATCA AAAGGCTTCG
ACTTGGATTT TGCAGGCCAA TGATATGGTT AAACCCCAGT GGTTTGAACC AGCGATGATG
CAGGCATTAA ACCCGCTGTT AGTAATGTTG TTGATCCCCT TTAATAACTT TGTGTTATAT
CCCGCGATTG AGCGTATGGG CGTCAAATTA ACTGCGCTGC GTAAAATGGG GGCTGGGATA
GCGATTACAG GCTTAAGCTG GATTGTGGTG GGGACTATTC AATTGATGAT GGATGGTGGT
TCTGCACTTT CTATCTTCTG GCAGATTTTA CCTTACGCTT TACTTACATT TGGTGAAGTA
CTGGTTTCGG CAACAGGACT TGAGTTTGCT TACAGCCAAG CGCCTAAAGC GATGAAAGGG
ACTATTATGA GTTTCTGGAC TCTCTCAGTC ACGGTCGGTA ACCTTTGGGT ATTGCTTGCG
AATGTGAGTG TTAAAAGTCC TACTGTGACC GAACAAATAG TGCAAACGGG GATGAGCGTG
ACGGCATTCC AAATGTTTTT CTTTGCCGGT TTTGCCATTC TAGCGGCAAT TGTCTTTGCA
CTGTATGCCC GTTCATATCA AATGCAGGAT CATTATCGGC AAGCGACATA A
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| Protein sequence | MTTPVDAPKW PRQIPYIIAS EACERFSFYG MRNILTPFLM TALLLSIPEE LRGAVAKDVF
HSFVIGVYFF PLLGGWIADR FFGKYNTILW LSLIYCVGHA FLAIFEHSVQ GFYTGLFLIA
LGSGGIKPLV SSFMGDQFDQ SNKSLAQKAF DMFYFTINFG SFFASLSMPL LLKNFGAAVA
FGIPGVLMFV ATVFFWLGRK RYIHMPPEPK DPHGFLPVIR SALLTKVEGK GNIGLVLALI
GGVSAAYALV NIPTLGIVAG LCCAMVLVMG FVGAGASLQL ERARKSHPDA AVDGVRSVLR
ILVLFALVTP FWSLFDQKAS TWILQANDMV KPQWFEPAMM QALNPLLVML LIPFNNFVLY
PAIERMGVKL TALRKMGAGI AITGLSWIVV GTIQLMMDGG SALSIFWQIL PYALLTFGEV
LVSATGLEFA YSQAPKAMKG TIMSFWTLSV TVGNLWVLLA NVSVKSPTVT EQIVQTGMSV
TAFQMFFFAG FAILAAIVFA LYARSYQMQD HYRQAT
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