| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA1161 |
|---|
| Symbol | |
|---|
| ID | 1165614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 1160622 |
|---|
| End bp | 1162136 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637332248 |
|---|
| Product | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase |
|---|
| Protein accession | NP_700314 |
|---|
| Protein GI | 23500874 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGC TCGACGACAA TGTCGCCAAA GCAAAAACCT ATCTTGCCCG GTTTGAAAAA
GGGGTTCTGA ACCGCATTGG CGGTGAAGAC GTGGCCGCTG CCGATGGCGC GACTTTCGAG
ACGATTTCGC CGGTGGACCT GAAGCCGCTT GCAACCGTGG CGCTTGGCAA GGCAGCGGAT
ATCGACCGTG CTGCCAGGGC GGCAAAGGCC GCCTTTCCCG AATGGGCCGC AATGTCGGGC
GATGCGCGCA AGAAGCTCCT GCACAAGATT GCCGATGCCA TTGTCGCCCG TGCCGAGGAA
ATCGCCTTCG TGGAATGCAT GGATACGGGC CAGTCGCTGA AATTCATGGC CAAGGCGGCA
CTGCGCGGCG CGGAAAATTT CCGCTTCTTC GCAGACCGTG CACCGGAAGC CCGCGACGGC
AAGACGCTTC GCGGCCCCGG CCAGGTCAAT ATGACAACCC GTGTACCCAT CGGGCCGGTC
GGCGTCATCA CGCCGTGGAA CACGCCTTTC ATGCTGTCGA CATGGAAGAT CGCTCCGGCA
CTTGCGGCAG GATGCACCGT GGTTCACAAG CCGGCTGAAT TTTCACCGCT GACGGCGCGC
CTGCTCGTTG AAATTGCCGA GGAAGCCGGT CTGCCGAAAG GCGTATGGAA CCTCGTCAAT
GGCTTCGGGG AAGATGCGGG CAAGGCCCTG ACCGAGCATC CCGACATCAA GGCCATCGGC
TTTGTGGGCG AAAGCCGCAC AGGCTCGCTC ATCATGAAGC AGGGGGCGGA TACGCTGAAG
CGTGTGCATT TTGAGCTTGG CGGCAAAAAC CCGGTGGTCG TCTTTGCCGA TGCCGATCTG
GAGCGCGCTG TCGATGCCGC CGTCTTCATG ATCTATTCGC TGAATGGTGA ACGCTGCACG
TCTTCCTCGC GCCTGCTGGT GGAAGCAAGC ATCTATGAAA AATTCACCGC GCTGGTCGCT
GAAAAGGCAA AGCGTATCAA GGTCGGCCAT CCGCTCGATC CTGAAACGGT TGTTGGCCCT
CTGATCCATC CGGTTCATGA AAAGAAAGTG CTGGAATATA TCGAGATCGG CCGCAGCGAA
GGCGCGACGG TTGCCGCAGG CGGCGCAAAA TTCGCAGGGC CGGGCGGTGG CTGCTATGTG
TCGCCGACAC TTTTCACCGC CGCCCACAAC GGCATGCGCA TCGCGCAGGA GGAGATTTTC
GGCCCGGTTC TGACCGCCAT TCCTTTCAAG GACGAGGCCG AGGCGCTGGC GCTTGCCAAT
GATGTGAAGT ACGGCCTGAC CGGCTATCTA TGGACCAATG ACGTGACCCG CGCTTTCCGT
TTCACCGATG CGCTGGAAGC CGGAATGATC TGGGTCAACT CGGAAAATGT GCGCCATCTG
CCAACGCCAT TCGGCGGCGT GAAGAATTCC GGCATCGGCC GCGACGGCGG CGACTGGTCG
TTCGATTTCT ACATGGAAAC CAAGAATATC GCCTTCGCCA ACGCTGCGCA CGCGATTGCA
AAACTCGGCG GCTGA
|
|---|
| Protein sequence | MSKLDDNVAK AKTYLARFEK GVLNRIGGED VAAADGATFE TISPVDLKPL ATVALGKAAD
IDRAARAAKA AFPEWAAMSG DARKKLLHKI ADAIVARAEE IAFVECMDTG QSLKFMAKAA
LRGAENFRFF ADRAPEARDG KTLRGPGQVN MTTRVPIGPV GVITPWNTPF MLSTWKIAPA
LAAGCTVVHK PAEFSPLTAR LLVEIAEEAG LPKGVWNLVN GFGEDAGKAL TEHPDIKAIG
FVGESRTGSL IMKQGADTLK RVHFELGGKN PVVVFADADL ERAVDAAVFM IYSLNGERCT
SSSRLLVEAS IYEKFTALVA EKAKRIKVGH PLDPETVVGP LIHPVHEKKV LEYIEIGRSE
GATVAAGGAK FAGPGGGCYV SPTLFTAAHN GMRIAQEEIF GPVLTAIPFK DEAEALALAN
DVKYGLTGYL WTNDVTRAFR FTDALEAGMI WVNSENVRHL PTPFGGVKNS GIGRDGGDWS
FDFYMETKNI AFANAAHAIA KLGG
|
|---|
| |