| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA1078 |
|---|
| Symbol | |
|---|
| ID | 1165525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 1060436 |
|---|
| End bp | 1061440 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637332168 |
|---|
| Product | peptide ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_700240 |
|---|
| Protein GI | 23500800 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.407234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGA ACTCCACGGA GATCGCGCTT TCGGTTCGCG GGCTGCGAAA GAGCTTTCCC
GTCAAGGGCG GCACGTTCAT TCAGCGCGAT ATTGCCGCGG TCAAAGCCGT CGATGATATC
TCGTTCGATC TGCGCAAAGG GGAAACGCTC GGCCTCGTCG GCGAGTCCGG CTGCGGAAAG
TCCACGCTGG GACGATGTAT CCTTCGGCTG ATCGAACCGT CGGACGGGCA GGTCCTGTTC
CGGGGGAACG ATATGACCAA ACTCAATGCG CGCGACATGC GCGCCGCGCG CAAGCATCTC
CAGTTCGTGT TTCAGGACCC CATCGCCTCG CTTCATCCGC GCATGCGCAT CAAGGAAAGC
ATTGCGGAGC CGTTACGCAT CAGCGATCTC ACGCAAGCAG AGCGCAAGGA GCGCGTGCAG
GAAATGCTGC GTCTGGTGCG GTTCAACCCG GAGCACGGCA AACGCTATCC GCATGAGCTT
TCCGGCGGGC AGCGTCGGCG CGTAGTGATT GCGTGTGCCT TGGCCCTCAA TCCGCAGGTC
ATGGTGCTGG ATGAGCCCGT CTCGGCGCTC GATGTTTCCG TTCAGGCCGG TGTCTTGAAT
CTCCTTCAGG ATATTCAGGA GCGGTTCGGG ACATCTTATG TTTTCATTGC CCATGACCTG
TCGGTTGTGC GCCATATCTC GCACACCGTT GCCGTCATGT ATCTTGGCCG CATCGTGGAA
AAGGCCCCCG AAGCCCGGCT TTATGGGCAT CCGCTGCATC CCTACACGCA GGCCTTGATG
TCGGCAGTGC CTCTCGCCGA TCCGGTCATC GAGCGCAAGC GGCAGCAGAT ATTGCTGAAA
GGCGACGTGC CAAGCCCGAT CAATCCGCCT TCCGGCTGTC CGTTCCGCAC CCGTTGTTTC
AGGGCACAGG CAGTCTGCGC CGAAGTGAGG CCCGAATTGC AGAGCCGGGG AGGCGGCCAT
GAGGTGGCGT GCCACTTCCC GGAGGAATGG CGGGCAGCAT CCTGA
|
|---|
| Protein sequence | MRENSTEIAL SVRGLRKSFP VKGGTFIQRD IAAVKAVDDI SFDLRKGETL GLVGESGCGK
STLGRCILRL IEPSDGQVLF RGNDMTKLNA RDMRAARKHL QFVFQDPIAS LHPRMRIKES
IAEPLRISDL TQAERKERVQ EMLRLVRFNP EHGKRYPHEL SGGQRRRVVI ACALALNPQV
MVLDEPVSAL DVSVQAGVLN LLQDIQERFG TSYVFIAHDL SVVRHISHTV AVMYLGRIVE
KAPEARLYGH PLHPYTQALM SAVPLADPVI ERKRQQILLK GDVPSPINPP SGCPFRTRCF
RAQAVCAEVR PELQSRGGGH EVACHFPEEW RAAS
|
|---|
| |