| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0916 |
|---|
| Symbol | |
|---|
| ID | 1165360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 901039 |
|---|
| End bp | 902157 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637332008 |
|---|
| Product | HlyD family secretion protein |
|---|
| Protein accession | NP_700083 |
|---|
| Protein GI | 23500643 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGGG CTGCGCGAAC AGGCAAATAC CTGATTTTGG GCGCATTCGC CGGTCTTGCA
ACCTGCATTC AGATCCTGTC GGCCGGAAGT CCGGCATATG CTGATTCACT CAATGTCGTG
CCGGTTGCGG TCCGGGAAGC GAAGCTTGTC GATTACCAGC CGAAATTGAC GCTTTCCGGG
GCTGTCGCCG CGCGCTCTCT GGTCAATGTA TCGTTCCGCG TCAATGGTCA GGTGGTCGAA
CGGCTGGTCG ATATCGGGCA GCATGTCGAA AAGGGGCAGC TTCTGGCCCG CATCGACGAT
GTTGAACAGC GCGCCAATAT GCGCGTTGCG CAGGCTTCCA TGGACGCCGC AGAAGCGCAG
CTCGTGCAGG CCGACGCCAA TTTCAAGCGC CAGCAGGCGC TGTTGAAGCA GGGTTTTACC
ACGCGCAGCC AGTATGACCA GGCCGATCAG GCATTGCGCA CCGCGCAAAG TGCGCTTTCC
AGCGCGCAAA GCCAGCTTGG CAATGCACGC GACGAGCTTT CCTATACCGA GCTTCATGCC
CCTGTTTCAG GCGTCGTTAC GGCGCGCAAT ATCGAAACGG GTCAGGTCGT GCAGGCAGCG
CAAACGGCTT TCTCCATTGC GGAAGACGGC TCGCGCGACG CTATTTTCGA TGTGCAGGAA
ACATTGGTGA ATCATGCCCG CATTGGAATG GGCGTAACGG TTGCCCTGCT TGCCGATCCT
TCCATTGAAG CAGAGGGCAA TATCCGTGAA TTGTCGCCGG TTGTTGACGC ACAGACCGGC
ACAGTGCGGG TCAAGGTAGG CATTGCGCAG GCAACTGCGC AGATGGCGCT TGGCGCAATC
GTCACCGGAA CTGTCCATAT GGATGCGCGG CAGGTGATCG TGCTGCCATG GAGCGCGATG
ACCTCGGAGG CGGGACGAAC GGCCGTCTGG CGCGTGGATA GGGACACGCA TGTCGCGACA
CTCGTTCCGA TCAAGGTGCT GGCCTATGAA AAAGAGCGCG TGATCGTCGA AAGCGGCCTT
AATAAAGGTG AGCTTATCGT GACCAAAGGT GCGCAGATGC TGCGCTCCGG CGAGCCGGTA
GAGATCATGC AGGGGCCTGA AGGAGCTGGC TCGCAATGA
|
|---|
| Protein sequence | MQRAARTGKY LILGAFAGLA TCIQILSAGS PAYADSLNVV PVAVREAKLV DYQPKLTLSG
AVAARSLVNV SFRVNGQVVE RLVDIGQHVE KGQLLARIDD VEQRANMRVA QASMDAAEAQ
LVQADANFKR QQALLKQGFT TRSQYDQADQ ALRTAQSALS SAQSQLGNAR DELSYTELHA
PVSGVVTARN IETGQVVQAA QTAFSIAEDG SRDAIFDVQE TLVNHARIGM GVTVALLADP
SIEAEGNIRE LSPVVDAQTG TVRVKVGIAQ ATAQMALGAI VTGTVHMDAR QVIVLPWSAM
TSEAGRTAVW RVDRDTHVAT LVPIKVLAYE KERVIVESGL NKGELIVTKG AQMLRSGEPV
EIMQGPEGAG SQ
|
|---|
| |