| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0537 |
|---|
| Symbol | |
|---|
| ID | 1164975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 517549 |
|---|
| End bp | 519126 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637331643 |
|---|
| Product | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein |
|---|
| Protein accession | NP_699724 |
|---|
| Protein GI | 23500284 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.75807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGCG GAATTTTGAT GACAGGCATT TGCCTTCTGG CGTTGAACAG TGCCGCATCG
GCACAAACAG TGCTCAACCG GGGTAACGAT ACCGATCCCG CGACACTGGA TCAGCACCAT
ACTTCGACCG TTTCCGAAAA CCGCGTTCTC CGCGACCTTT ATGAAGGTCT TCTGGCGCAA
AATGCCAAGG GCGAAGCCAT TCCGGGCGCT GCCTCCTCTT GGGATATTTC GGAAGACGGC
AAGGTCTATA CCTTTCATAT GCGCGACGGC GCAAAATGGT CAAACGGTGA TCCGGTGACG
GCTGGCGACT TCGAGTTCTC GTTCCGCCGC ATCATGGACC CGAAGACGGC AGCCGGTTAT
GCAAGCGTTC TTTATGCGAT CCAGAATGGC GAAGAAGTTG CAACCGGAAA AATGCCGGTG
GACCAGCTTG GCGTGAAGGC GCTGGACGAC AAGACACTCC AGATCACGTT GAAAAGCCCT
GCCCCTTATT TTCTTGAGTT TCTGACGCAC CAGACCGGCT TTCCGGTCAA CAAGAAAGCT
GTCGAGAAGT TTGGTGACAA GTTCACCCTT CCCGGCAATC TCGTGACCAA TGGCCCTTAC
CAGCTTGTCA GCTTCGTACC GAATGACAAG ATCGTCATGA AAAAGAACCC GAACTACTGG
GATGCCGATA ACGTCAAGAT CGACACGGTC AACTGGATGC CCTTTGAAGA CCGGTCGAGC
TGTATGCGCC GCTTTGAGGC AAAGGAAGTG GATATCTGCT CCGATGTTTC TGCCGAGCAG
ATGGACTATG TGAAGAAGAA CCTTTCCAAG GAATTCCGCC TCGCGCCCTA TCTTGGCATT
TATTACGTGG ACATTAAGGG CGAGCCTTCC AGCAAACTGC GCGATCCGCG TGTGCGCCGC
GCCATTTCTC TGGCCGCGGA CCGGGAATTC ATGGCGGATG AGGTCTGGCG TGGCGTCATG
CTGCCCGCCT ATTCCATGGT GCCGCCCGGC ATCGCCAATT ACGTGAAGGA TGCACCGAAG
CTCGACTTTG CCAATGAAGA CATTCTCGAC CGCGAAGACA AGGCGAAGGA GCTTTTGAAG
GAAGCAGGCG TGGAGCCCAA TACGCTGTCG GTGACGCTGC GCTACAACAC ATCGGAAAAT
CACAAGAATA CGATGGCAGC CTTTGCCAAC ATGCTGAAAA ACATCGGCAT CAATGCCAAG
CTGGATGAGG TCGAAGGCAC GACCTATTTC AACTATCTTC AGGAAAAAGG CATGTTCGAC
CTGACCCGTG ACGGCTGGAT CGGAGATTAT AACGATCCGA ATTCGTTCCT GGAACTTTAT
ACAACCGGCA ATTATTTCAA TTATGCCGAA TGGTCGAACA AGGATTACGA TGCGCTGATG
GATAAATCTG CTGTCACGAC CGATCTCGCC GAACGTGCGA AGATCCTGGC TGAGGCAGAA
GAGATTCTCC TGAAGGAAGG GGCTATCGTG CCATTGATGT ATTATTCGTC GACCGCATTG
GTTGCCGACA GGGTTCAAGG TTGCGACGAT AACCTCATGA ACTCGCACGG CACGCGCTGG
CTATCCGTCA AGAACTAA
|
|---|
| Protein sequence | MVRGILMTGI CLLALNSAAS AQTVLNRGND TDPATLDQHH TSTVSENRVL RDLYEGLLAQ
NAKGEAIPGA ASSWDISEDG KVYTFHMRDG AKWSNGDPVT AGDFEFSFRR IMDPKTAAGY
ASVLYAIQNG EEVATGKMPV DQLGVKALDD KTLQITLKSP APYFLEFLTH QTGFPVNKKA
VEKFGDKFTL PGNLVTNGPY QLVSFVPNDK IVMKKNPNYW DADNVKIDTV NWMPFEDRSS
CMRRFEAKEV DICSDVSAEQ MDYVKKNLSK EFRLAPYLGI YYVDIKGEPS SKLRDPRVRR
AISLAADREF MADEVWRGVM LPAYSMVPPG IANYVKDAPK LDFANEDILD REDKAKELLK
EAGVEPNTLS VTLRYNTSEN HKNTMAAFAN MLKNIGINAK LDEVEGTTYF NYLQEKGMFD
LTRDGWIGDY NDPNSFLELY TTGNYFNYAE WSNKDYDALM DKSAVTTDLA ERAKILAEAE
EILLKEGAIV PLMYYSSTAL VADRVQGCDD NLMNSHGTRW LSVKN
|
|---|
| |