Gene BRA0533 details

Gene Information

• Locus tag: BRA0533
• Symbol: alkB
• ID: 1164971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004311
• Strand: -
• Start bp: 512953
• End bp: 513591
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637331639
• Product: alkylated DNA repair protein AlkB
• Protein accession: NP_699720
• Protein GI: 23500280
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3145] Alkylated DNA repair protein
• TIGRFAM ID: [TIGR00568] DNA alkylation damage repair protein AlkB

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.478593
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACC TCTTTGACAA TTTGAACACG CGCGAGATTA TGGCGCCGGG GGCCGTGCTT 
CTGCGCGGTT TTGCGCTTGC CTGTGAAGAA TCGATCCTGA GCGCGGTGGC CAGGGTTTGC 
GCAGCAGCAC CTTTTCGGCA TATGACCACA CCCGGCGGTT ATCGCATGTC TGTCGCCATG 
ACCAATTGCG GCCCTGTGGG ATGGGTGACA GACCGCACCG GATACCGATA CAGCCCTGCC 
GATCCCGAAA CCGGCAAGCC ATGGCCATCC ATGCCCGATA CGTTCCTTGC CCTTGCCCAG 
GACGCAGCGC GGCAAGCAGG CTATCCTGAT TTTACGCCTG ATGCCTGCCT CATCAATCGT 
TATGAGCCGG GCGCAAGGCT TTCGCTCCAT CAGGACAAGG ACGAACGGAA TTTTTCCAAT 
CCCATCGTTT CCGTTTCACT TGGCCTGCCG GCAACGTTTC AGTTTGGCGG AATGAAACGG 
ACGGACCCGA TCACCAAATA TATCCTGCAC CATGGCGACG TGGTTGTCTG GGGCGGGCCG 
TCGCGGCTTT TCTATCACGG TATTCTGCCA TTGAAGTCTG GCGAGCATGA GCGGCTGGGG 
CCGTTTCGGC TTAATCTGAC CTTCCGAAAG GCGTTCTAG 

 

Protein sequence

MKDLFDNLNT REIMAPGAVL LRGFALACEE SILSAVARVC AAAPFRHMTT PGGYRMSVAM 
TNCGPVGWVT DRTGYRYSPA DPETGKPWPS MPDTFLALAQ DAARQAGYPD FTPDACLINR 
YEPGARLSLH QDKDERNFSN PIVSVSLGLP ATFQFGGMKR TDPITKYILH HGDVVVWGGP 
SRLFYHGILP LKSGEHERLG PFRLNLTFRK AF