Gene BRA0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBRA0060 
Symbol 
ID1164497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella suis 1330 
KingdomBacteria 
Replicon accessionNC_004311 
Strand
Start bp57868 
End bp59043 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content59% 
IMG OID637331185 
Producttype IV secretion system protein VirB10 
Protein accessionNP_699267 
Protein GI23499827 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2948] Type IV secretory pathway, VirB10 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGG AAAACATTCC GGTGCAGCCG GGCACACTTG ACGGTGAGCG TGGCCTACCC 
ACCGTGAACG AAAACGGCTC CGGCCGCACC CGCAAGGTGT TGCTCTTTCT CTTTGTCGTG
GGCTTCATCG TCGTGCTGCT GTTGCTGCTC GTGTTTCACA TGAGGGGCAA TGCAGAGAAT
AATCACCATT CAGACAAGAC GATGGTGCAG ACCAGCACAG TTCCGATGCG AACTTTCAAG
CTGCCACCCC CGCCACCCCC GCCACCACCA GCACCACCAG AACCACCAGC CCCGCCACCG
GCCCCAGCCA TGCCCATCGC GGAACCCGCA GCGGCGGCGC TGAGCCTGCC ACCATTGCCG
GATGATACGC CGGCAAAGGA CGATGTACTG GACAAGTCGG CCAGCGCGTT GATGGTCGTC
ACCAAGTCCA GCGGCGATAC GAACGCTCAA ACGGCCGGTG ATACGGTCGT TCAAACGACC
AATGCGCGCA TTCAAGCCCT GCTCGACAGT CAAAAGAACA CCAAGCAGGA TGCTGGATCG
CTGGGTACTC TCCTTCACGG CACACAAACG GATGCACGCA TGGCGAGCCT TCTGCGCAAC
CGTGATTTCC TGCTCGCGAA GGGCAGCATC ATCAATTGCG CGCTGCAAAC CCGTCTGGAT
TCGACGGTGC CGGGCATGGC TGCCTGCGTG GTCACACGCA ACATGTATAG CGATAACGGC
AAGGTGTTGC TGATTGAGCG CGGTTCAACC ATCTCGGGTG AATATGATGC CAACGTAAAG
CAGGGCATGG CTCGCATTTA TGTCCTGTGG ACGCGCGTGA AGACGCCGAA CGGTGTCGTG
ATCGATCTCG ACTCTCCAGG CGCCGACCCC CTGGGCGGGG CAGGCTTGCC CGGCTACATC
GACTCCCACT TCTGGAAGCG CTTTGGCGGC GCCTTGATGT TGAGCACGAT CGAGACCCTC
GGCCGCTATG CAACCCAGAA GGTCGGCGGC GGGGGTTCAA ATCAGATCAA CCTCAATACC
GGCGGAGGTG AATCGACGAG CAACCTGGCT TCAACTGCCT TGAAGGATAC GATCAACATT
CCGCCGACAC TGTACAAGAA CCAGGGCGAA GAGATCGGCA TCTATATCGC CCGCGACCTA
GATTTTTCGA GTGTGTATGA TGTCAAACCG AAGTGA
 
Protein sequence
MTQENIPVQP GTLDGERGLP TVNENGSGRT RKVLLFLFVV GFIVVLLLLL VFHMRGNAEN 
NHHSDKTMVQ TSTVPMRTFK LPPPPPPPPP APPEPPAPPP APAMPIAEPA AAALSLPPLP
DDTPAKDDVL DKSASALMVV TKSSGDTNAQ TAGDTVVQTT NARIQALLDS QKNTKQDAGS
LGTLLHGTQT DARMASLLRN RDFLLAKGSI INCALQTRLD STVPGMAACV VTRNMYSDNG
KVLLIERGST ISGEYDANVK QGMARIYVLW TRVKTPNGVV IDLDSPGADP LGGAGLPGYI
DSHFWKRFGG ALMLSTIETL GRYATQKVGG GGSNQINLNT GGGESTSNLA STALKDTINI
PPTLYKNQGE EIGIYIARDL DFSSVYDVKP K