| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR2069 |
|---|
| Symbol | aroE |
|---|
| ID | 1167772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 1995752 |
|---|
| End bp | 1996606 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637331008 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | NP_699044 |
|---|
| Protein GI | 23502917 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGG GGCGAAAGGC TTTCGTTACC GGATTTCCGA TCAAGCATTC GCGTTCGCCG
CTGATCCACG GTTTCTGGTT GAAGGAACTG GGCATTGACG GGTCTTATGA GGCTGTGGAA
GTCAAGCCGG AAGATTTCTC CTCTTTTGCA GCTTCGCTTG CCGCAAATGG CTTTGCTGGC
GGAAATGTCA CCATTCCCCA CAAGGAGGCG GCCTATGCCG CTGCTGAAAG CCTTGATGAA
GCAGCCTGCG CCATCGGCGC GGTCAACACA CTCTGGCTTG AAAATGGCAG GCTTTGCGGC
GGCAACACCG ATGCCTATGG TTTTGCCGCC AATCTGGATG CTTCCGCTCC CGGCTGGGAC
AAGGCTGATC GCGCTTTGGT TCTGGGTGCC GGCGGGGCAA GCCGGGCGGT GGTTCATGCG
CTTTTGTCGC GCGGCGTCTG TCATGTTTCG GTGGTGAACC GCACGTTGAG CCGGGCGGAA
GAACTGGCGG CGCATTTCGG CGCGCGCGTT TACGCCCATG GCTGGGATGA GGCGCAAGCT
CTTGTTTCCA ATGCTGGTCT TATCGTCAAC ACGACCGCGC TCGGCATGAG CGGGCATGGC
GAGGGACAGG ATTTTCCGAT CGACCTTACA TGCGCGCCGA AAGAGGCGGT GGCGACAAAT
ATCGTCTATG TGCCGCTTAG AACAGCTTTC CTGAACAAAG CCGAAAAAGC CGGTTTGAAG
ACAGTGGACG GGCTTGGCAT GTTGCTGCAT CAGGCTGTTC CGGGCTTTGA ACGATGGTTC
GGGCAAAGGC CGCAGGTGAC GCAGGCATTG CGAGAGCATA TTCTGGCGGA TATGGCGAAG
GCTGGTGCGC TATGA
|
|---|
| Protein sequence | MARGRKAFVT GFPIKHSRSP LIHGFWLKEL GIDGSYEAVE VKPEDFSSFA ASLAANGFAG
GNVTIPHKEA AYAAAESLDE AACAIGAVNT LWLENGRLCG GNTDAYGFAA NLDASAPGWD
KADRALVLGA GGASRAVVHA LLSRGVCHVS VVNRTLSRAE ELAAHFGARV YAHGWDEAQA
LVSNAGLIVN TTALGMSGHG EGQDFPIDLT CAPKEAVATN IVYVPLRTAF LNKAEKAGLK
TVDGLGMLLH QAVPGFERWF GQRPQVTQAL REHILADMAK AGAL
|
|---|
| |