Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BR1902 |
Symbol | sdhA |
ID | 1167602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004310 |
Strand | - |
Start bp | 1836796 |
End bp | 1838637 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637330841 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | NP_698880 |
Protein GI | 23502753 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAGTG CAGTAAACAA TGCGGCGCCC GCCGCTGCAA GCAAGTACAC CTATGTCGAT TACAAGTTCG ACGTGGTGGT GGTCGGAGCC GGCGGCGCGG GCTTGCGCGC AACCCTCGGC ATGGCCGAAC AGGGCCTCAA GACGGCTTGT ATCACCAAGG TTTTCCCGAC CCGCTCGCAT ACGGTTGCGG CGCAGGGCGG CATCGCCGCT TCGCTCAAGA ACATGGGGCC GGATAGCTGG CAGTGGCATA TGTACGACAC CGTGAAAGGG TCGGACTGGC TGGGCGATAC CGACGCCATG GAATATCTGA CCCGCGAAGC GCCTGCCGCC GTCTACGAGC TTGAGCATTA CGGCGTGCCG TTCTCGCGTA CGGAAGAAGG CAAGATCTAT CAGCGCCCCT TTGGCGGCCA CATGCAGAAT TTCGGCGATG GTCCTCCGGT TCAGCGCACC TGCGCTGCTG CCGACCGTAC CGGCCATGCC ATCCTGCATA CGCTTTACGG CCAGTCGCTG AAGAACAATG CGCAGTTCTT CATTGAATAT TTCGCGCTCG ACCTCATCAT GACCGATGGC GTGTGCACCG GCGTCGTGGC GTGGAACCTC GATGACGGCA CGATCCATCG CTTCTCCGCC AAGATGGTGG TTCTGGCGAC GGGCGGCTAT GGCCGCGCCT ATTTCTCGGC AACCTCTGCC CATACCTGCA CCGGCGACGG CGGCGGCATG GTGGCACGCG CCGGCCTGCC GTTGCAGGAC ATGGAATTCG TGCAGTTCCA CCCGACCGGC ATTTATGGCG CGGGCTGCCT CATCACCGAA GGCGCGCGCG GCGAAGGCGG CTATCTGGTC AATTCCGAAG GCGAACGCTT CATGGAGCGT TATGCCCCCT CGGCCAAGGA CCTTGCCTCG CGAGACGTTG TTTCGCGCTG CATGACGATG GAAATTCGTG CGGGCCGCGG CGTCGGCAAG AACAAGGACC ACATCTACCT GCATCTCGAC CATCTCGACC CTGCTGTTCT GCATGAACGC CTGCCGGGCA TTTCCGAGTC GGCCAAGATT TTCGCGGGCG TGGATGTGAC CAAGGAACCG ATCCCGGTTC TGCCGACCGT TCACTACAAT ATGGGCGGCA TTCCGACCAA CTATTGGGGC GAAGTGCTGA ACCCGACCAA GGAAGACCCG GACCGCGTGC AGCCGGGCCT GATGGCCGTG GGCGAAGCGG GCTGCGCTTC GGTGCATGGC GCAAACCGTC TCGGCTCCAA CTCGCTGATC GATCTCGTGG TGTTCGGCCG CGCGGCTGCG ATCCGCGCCG GTCAGGTCAT CGACCGCAAG TCGAAGATCC CGGATATCGA TATCGCTGCC TGTGACAAGA TCATGGAACG CTTCGACCGC CTGCGCTTTG CCAACGGCTC CACGCCGACG GCTGTGCTGC GTGAAAAGAT GCAGCGCACC ATGCAGGAAG ATGCCGCCGT GTTCCGCACG GAGGAATCGC TCAAGCAGGG TGTCGAGCGC ATGGAAAAGC TCTGGCATGA ACTGCCGGAC ATCAAGGTCA CAGACCGCTC CATGATCTGG AACTCGGATC TCGTTGAAAC GCTGGAACTT GAAAATCTGA TGGCGAATGC GCTGACGACC GTTGTTTCGG CGGAAGCCCG TCAGGAAAGC CGCGGCGCCC ATGCGCGCGA GGATTTCCCG GACCGCAACG ACGCGGAATG GCGCAAGCAC ACGCTTTCCC GGCTTTCGCC TGACGGCAAG GTCACGCTCG ACTATCGTTC GGTTCATCTC GATCCGCTGA CGACGGAAGA GGAAGGTGGC ATCAGCCTCG CCAAGATTGC GCCGAAGAAG CGCGTTTACT GA
|
Protein sequence | MASAVNNAAP AAASKYTYVD YKFDVVVVGA GGAGLRATLG MAEQGLKTAC ITKVFPTRSH TVAAQGGIAA SLKNMGPDSW QWHMYDTVKG SDWLGDTDAM EYLTREAPAA VYELEHYGVP FSRTEEGKIY QRPFGGHMQN FGDGPPVQRT CAAADRTGHA ILHTLYGQSL KNNAQFFIEY FALDLIMTDG VCTGVVAWNL DDGTIHRFSA KMVVLATGGY GRAYFSATSA HTCTGDGGGM VARAGLPLQD MEFVQFHPTG IYGAGCLITE GARGEGGYLV NSEGERFMER YAPSAKDLAS RDVVSRCMTM EIRAGRGVGK NKDHIYLHLD HLDPAVLHER LPGISESAKI FAGVDVTKEP IPVLPTVHYN MGGIPTNYWG EVLNPTKEDP DRVQPGLMAV GEAGCASVHG ANRLGSNSLI DLVVFGRAAA IRAGQVIDRK SKIPDIDIAA CDKIMERFDR LRFANGSTPT AVLREKMQRT MQEDAAVFRT EESLKQGVER MEKLWHELPD IKVTDRSMIW NSDLVETLEL ENLMANALTT VVSAEARQES RGAHAREDFP DRNDAEWRKH TLSRLSPDGK VTLDYRSVHL DPLTTEEEGG ISLAKIAPKK RVY
|
| |