Gene BR1888 details

Gene Information

• Locus tag: BR1888
• Symbol: gcp
• ID: 1167588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 1822616
• End bp: 1823695
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637330828
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: NP_698867
• Protein GI: 23502740
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGTTC TTGGAATAGA AACAAGTTGC GACGAAACAG CCGCCGCAAT CGTCGAGCGT 
GACGATATGG GCGAAGGGCG GATTTTGTCC AATGTGGTTC TGAGCCAGAT TGCCGAGCAC 
GAGCCCTATG GCGGCGTGGT GCCGGAGATC GCCGCCCGCG CCCATGTCGA GGCATTGGAC 
AGGCTGGTGG ACCGTGCCCT GAACGACGCG GGCCTGAAAC TGTACGAGGT GGATGCAGTG 
GCCGCTACGG CTGGCCCCGG CCTCATCGGC GGGCTGATCG TCGGGCTGAT GACGGCAAAG 
GCGCTCGCCA TGGCTGCACA AAAGCCCTTC TATGCCGTCA ACCATCTGGA AGGCCACGCG 
CTGACGGCGC GGCTGACCGA CGGCCTGCCA TTTCCCTATC TGCTGCTTCT CGTTTCCGGT 
GGCCACACGC AGATGGTGCT TGTGCGCGGC ATCGGCGATT ATGAGCGCCT CGGCACCACC 
ATCGACGATG CGCTGGGCGA AGCCTTCGAC AAGACCGCAA AGCTTCTCGG CCTGCCTTAT 
CCCGGTGGCC CGGCTGTCGA GCGCATGGCG CTACAGGGCG ACCAGAAGCG TTTTGCCCTG 
CCGCGCCCGC TGAAAGGCGA AGCACGGCTG GATTTTTCCT TCTCCGGCCT TAAAACCGCC 
GTCCGCCAGA CCGCAACCGA ATTGGTGCCT CTCACCGATC AGGACGTCAC CGATATATGC 
GCCTCGTTTC AGGCTGCTGT CGCCGATACG CTTTCCGACC GTGTGGGCCG CTCGCTGGAG 
CGTTTCAAGA CGGAATTCCC GGATTGCGCC ACGCCCTCCC TGGTGGTTGC AGGCGGGGTT 
GCAGCCAACA AGACCCTGCG TGCCGCACTG GAAAACCTCT GCACCCGGCA TGGCTTTGCC 
TTTATCGCTC CGCCGCTTAA TCTTTGCACC GACAATGCAG CGATGATCGC ATGGGCGGGG 
GCTGAGCGCG CCGCGACCCA AGCGCCTGAT TCGCTTGACA TCGCCCCGCG CTCGCGCTGG 
CCGCTCGACG AAAAATCCGC GCCGGTCTTC GGCACGGGAC GGCGGGGAGC AAAGGCATGA 

 

Protein sequence

MRVLGIETSC DETAAAIVER DDMGEGRILS NVVLSQIAEH EPYGGVVPEI AARAHVEALD 
RLVDRALNDA GLKLYEVDAV AATAGPGLIG GLIVGLMTAK ALAMAAQKPF YAVNHLEGHA 
LTARLTDGLP FPYLLLLVSG GHTQMVLVRG IGDYERLGTT IDDALGEAFD KTAKLLGLPY 
PGGPAVERMA LQGDQKRFAL PRPLKGEARL DFSFSGLKTA VRQTATELVP LTDQDVTDIC 
ASFQAAVADT LSDRVGRSLE RFKTEFPDCA TPSLVVAGGV AANKTLRAAL ENLCTRHGFA 
FIAPPLNLCT DNAAMIAWAG AERAATQAPD SLDIAPRSRW PLDEKSAPVF GTGRRGAKA