| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1778 |
|---|
| Symbol | ispG |
|---|
| ID | 1167471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | - |
|---|
| Start bp | 1706505 |
|---|
| End bp | 1707767 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637330715 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | NP_698761 |
|---|
| Protein GI | 23502634 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.607316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCG AGACCGTCAG CTATTTTTCG CATCCATTTC CCCGCCGCCA GTCGGTTGGC
GTCAGTGTCG GTGGCGTTAT CGTCGGCGGC AGTGCGCCGG TGGTGGTCCA GTCCATGACC
AACACCGACA CGGCCGATGT GGATTCCACG GTTGCACAGG TGGCCGCGCT TCATCGTGCT
GGTTCGGAAA TCGTGCGCAT CACGGTGGAT CGTGATGAAT CGGCGGCTGC CGTGCCGAAA
ATCCGCGAGC GGCTGGAGCG TCTTGGCCAT GATGTGCCGC TGGTGGGCGA TTTCCATTAT
ATCGGTCACA AGCTGCTTGC CGATCATCCG GCCTGTGCGG AGGCTCTTGC CAAATACCGC
ATCAATCCCG GCAATGTCGG CTTCAAGGAC AAGAAGGACA AGCAGTTCGC CGATATTGTC
GAAATGGCGA TCCGCTACGA CAAGCCCGTG CGCATCGGCG TCAACTGGGG ATCGCTCGAT
CAGGAGCTTT TGACCACGCT GATGGACCGC AATCAGGCCG AGGGTGCGCC GCTTTCCGCG
CAGGATGTCA TGCGTGAAGC CATTGTGCAG TCTGCGCTGA TTTCGGCCAA TCTTGCCGAG
GAAATCGGGC TTGGCCGCGA CAAGATCATC CTGTCGGCCA AGGTCAGCCA GGTGCAGGAT
CTGATTGCCG TCTATACGAT GCTGGCGCAG CGTTCCAATC ATGCGCTGCA TCTGGGACTT
ACCGAAGCGG GGATGGGCAC GAAGGGCATC GTCGCGTCGT CGGCTGCCAT GGGCATTTTG
TTGCAGCAGG GCATTGGCGA TACGATCCGC ATTTCCCTGA CGCCGGAACC GGGCGGCGAC
CGCACGCGTG AAGTGCAGGT GGCGCAGGAA TTGCTGCAAA CCATGGGGTT CCGCCAGTTT
GTTCCGATTG TCGCCGCCTG TCCGGGCTGC GGCCGCACGA CGTCCACGGT GTTTCAGGAA
CTGGCGCAGA CCATTCAGGA AGATATCCGC CGCAATATGC CGCTCTGGCG CGAGAAATAT
CCGGGTGTCG AGGCGCTTTC GGTTGCTGTC ATGGGCTGTA TCGTCAATGG GCCGGGCGAA
TCGAAACATG CCGATATCGG CATTTCGCTT CCGGGCACCG GCGAAACCCC GTCCGCCCCG
GTTTTTGTGG ATGGCAAGAA GGTCGCGACC CTGCGTGGTC CGGGGATTGC CGAGGACTTC
CAGAAGATGG TTGCCGACTA TATCGAAAAC CGCTTTGGGC TTGGTCGTAA GATCGCGTCG
TGA
|
|---|
| Protein sequence | MSSETVSYFS HPFPRRQSVG VSVGGVIVGG SAPVVVQSMT NTDTADVDST VAQVAALHRA
GSEIVRITVD RDESAAAVPK IRERLERLGH DVPLVGDFHY IGHKLLADHP ACAEALAKYR
INPGNVGFKD KKDKQFADIV EMAIRYDKPV RIGVNWGSLD QELLTTLMDR NQAEGAPLSA
QDVMREAIVQ SALISANLAE EIGLGRDKII LSAKVSQVQD LIAVYTMLAQ RSNHALHLGL
TEAGMGTKGI VASSAAMGIL LQQGIGDTIR ISLTPEPGGD RTREVQVAQE LLQTMGFRQF
VPIVAACPGC GRTTSTVFQE LAQTIQEDIR RNMPLWREKY PGVEALSVAV MGCIVNGPGE
SKHADIGISL PGTGETPSAP VFVDGKKVAT LRGPGIAEDF QKMVADYIEN RFGLGRKIAS
|
|---|
| |