Gene BR1757 details

Gene Information

• Locus tag: BR1757
• Symbol: tbpA
• ID: 1167450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 1689183
• End bp: 1690187
• Gene Length: 1005 bp
• Protein Length: 334 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637330695
• Product: thiamine transporter substrate binding subunit
• Protein accession: NP_698741
• Protein GI: 23502614
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4143] ABC-type thiamine transport system, periplasmic component
• TIGRFAM ID: [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily; [TIGR01276] thiamine ABC transporter, periplasmic binding protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0106404
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTTT TATCCTTGCT TACCTTTTCG CTTTTTGCAG TCATCGGCCT TGCACCAGCC 
GCACAGGCCA AGGACACGCT TACTATCTAT ACCTATGACA GTTTCGTTTC CGAATGGGGA 
CCCGGCCCCA AGGTGAAGGA AAACTTCGAG AAGGAATGCG ATTGCGAGGT GAACTTCGTT 
GCCTCCGCCG ATGGTGTCGC GCTTCTCAAC CGCCTCAAGC TCGAAGGCAG CAAAACCGCC 
GCCGACATTG TTTTGGGGTT AGATACCAAC CTCACCACGG AAGCACGCGC ATCGGGCTTT 
TTCGCGCCGA GCGGGATCGA CCAGACCAAT GTGAAGGTGC CCGGCAACTT CAAGGATGAT 
ATTTTCGTGC CCTATGACTA TGGCTATTTT GCCGTGGTCT ATGATTCCGA AAAATTGCCC 
AATCCGCCGA AAAGCCTGAA GGAACTGGTC GAAGGCGATC CAGCGCAGAA GATCGTGCTG 
CAAGATCCGC GCACCGCGAC ACCGGGGCTT GGCATGTTGC TGTGGATGAA GTCTGTTTAT 
GGCGACGAGG CGGGTGCTGC ATGGCAGAAA CTGCAAAAGC GCGTCCTCAC CGTCACGCCC 
GGCTGGTCAG AAGCTTATGG CCTGTTCACC AAGGGTGAAT CACCGATGGT GCTGTCCTAC 
ACGACCTCTC CCGCCTATCA CATGGTTGTC GAAAAGACGG ACCGCTATAA GGCACTGGCC 
TATCCGGAAG GCAATTATCT TCAGATTGAG CTTGCCGCCC AGACCACCAC CGGCGCAAAG 
AACCCGCTGG CGAAAAAGTT TCTCGCCTTC ATGACTGGCC CCGGCTTTCA GGATGTGATC 
CCCGAAACCA ACTGGATGTT TCCGGCAGGC AAGACGTCCA AGCCGCTTCC AGCCGCCTTC 
GATGCCCTGC CGAAGCCGGA GAAGACCCTG CTCATCCCTC CCTACGAAGT GGCGAAAAAC 
CGCAGATTGT GGGTGAATGA ATGGCTGGCA GCCACCAGCA GATGA 

 

Protein sequence

MRLLSLLTFS LFAVIGLAPA AQAKDTLTIY TYDSFVSEWG PGPKVKENFE KECDCEVNFV 
ASADGVALLN RLKLEGSKTA ADIVLGLDTN LTTEARASGF FAPSGIDQTN VKVPGNFKDD 
IFVPYDYGYF AVVYDSEKLP NPPKSLKELV EGDPAQKIVL QDPRTATPGL GMLLWMKSVY 
GDEAGAAWQK LQKRVLTVTP GWSEAYGLFT KGESPMVLSY TTSPAYHMVV EKTDRYKALA 
YPEGNYLQIE LAAQTTTGAK NPLAKKFLAF MTGPGFQDVI PETNWMFPAG KTSKPLPAAF 
DALPKPEKTL LIPPYEVAKN RRLWVNEWLA ATSR