Gene BR1727 details

Gene Information

• Locus tag: BR1727
• Symbol: tkt
• ID: 1167420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 1665666
• End bp: 1667657
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637330665
• Product: transketolase
• Protein accession: NP_698711
• Protein GI: 23502584
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.827271
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAATA CCGACAAACA AAACCAGATG GCTAATGCAA TCCGCTTCCT CTCCATGGAT 
GCGGTGGAGA AGGCCAATTC GGGCCACCCC GGCCTGCCGA TGGGCGCAGC CGATATAGCG 
ACGACGCTTT ATACCCGTTT CCTCTCGCAC GACCCGAAAA ACCCGCACTG GCCGGACCGC 
GACCGTTTCG TGCTTTCCGC CGGCCACGGC TCGATGCTGC TCTATTCGCT GCTCTATCTT 
TCGGGCTACG AAGACATCAC CATCGATGAA ATCAAGAAAT TCCGCCAGCT TGGCAGCCGC 
ACCGCGGGCC ACCCTGAATA TGGCCATGCC GCTGGCATCG AAACGACGAC CGGCCCGCTC 
GGACAGGGTA TTGCCAATGC CGTCGGCATG GCGATTTCCG AACGCATCCT GAATGCCCAG 
TTCGGTGACA GCCTCGTCAA TCATTATACC TATGCGCTCG TCGGCGACGG CTGCCTCATG 
GAAGGCATCA GCCAGGAAGC CATCGCGCTT GCGGGACACC TGAAGCTCAA CAAGCTGATC 
GTGCTCTGGG ATGACAACAA CATCTCGATC GACGGCCCGA TCACGCTTTC CGACAATACC 
GATCAGCCAG CCCGTTTCGC CGCTTCCGGC TGGAACACCA TGGCTGTCGA CGGTCACGAC 
CAGGATGCGA TTGCCAAGGC CATCGAACTG GCCCGGGTCT CCGACCGCCC GACGCTGATC 
GCCTGCAAGA CGACCATCGG TTTCGGTGCT CCGAACAAGG CTGGCACCAA CAAGGTGCAC 
GGCTCACCGC TTGGCGCGGA AGAAATCGCC GCCACGCGCA AGGCGCTGGG CTGGTCTTCC 
GAACCTTTCG TCGTTCCGGC TGAAGTTCTG GACGCCTGGC GCGTCGCGGG CCTCAACGCC 
GCCAAGAAGC GCCTGGAATG GGAAAAGCGC CTTTCTGCCG TAGAAGCGGA AACCCGCGCC 
GAATTCGAGC GCCGCATGCG TGGCGAGCTG CCTTCCGGTT TCGATGCTGC AATCGTCGAA 
TACAAGAAGA AGCTTTCCGC CGACAAGCCG AAGGTTGCCA CCCGCAAGTC GTCCGAAATG 
GCGCTGGAAG TCATCAACGG TGTCGTGCCG GAAACCGTAG GCGGCTCTGC CGACCTTACC 
GGCTCCAACA ACACCAAGAC CAGCCAGACC AAGGCTGTCA CGCCGGAAAA CTATGATGGC 
CGTTATATCC ATTACGGCAT CCGCGAGCTT GGCATGGCTG CAGCGATGAA CGGCATCACG 
CTGCATGGCG GCCTGATCCC CTATTCCGGC ACCTTCCTGT GCTTCTCCGA TTATGCGCGT 
CCGGCCATGC GTCTTTCCTC GCTGATGGGC ATTCGCGTCG TCTATGTGAT GACGCATGAT 
TCCATCGGTC TTGGCGAAGA CGGCCCGACC CATCAGCCGG TCGAACATCT CGCCGCACTG 
CGCGCCATTC CGAACCACAA TGTCTTCCGT CCGGCAGACG CTGTGGAAAC GGCGGAATGC 
TGGCAGCTTG CGCTGCATTC AAGGAAGACG CCATCCACGC TGGCTTTGAC CCGCCAGAAC 
CTGCCGACGG TCCGCACCGA GCATCGCGAA GAAAACCTTT GCGCTTTCGG CGCCTACGAA 
CTTGCCGCCG CCAGCAGCGA CGCCAAGGTG ACGATCTTCG CAACGGGCTC GGAAGTGGAA 
ATTGCGCTGA AGGCCCGCGA TCTTCTGGAA GGCAAGGGCA TTGCCACCCG CGTCGTTTCG 
GTGCCGTGCT TTGAGCTTTT CGAGCAGCAG AGCGACGCCT ACAAGGAAGC GACCATTGGC 
GATGCGCCAA TCAAGCTTGC CATTGAAGCG GCCATCTCGC TCGGCTGGGA ACGCTTCATC 
GGCGAAAACG GCATCTTCAT CGGCATGAAG GGCTTCGGCG CTTCGGGTGA GATCAATGAT 
CTCTACAAGC ATTTCGGCAT CACGGCGGAA CATGCCGTCG AAGCTGCGGA AAAGAAGCTC 
AACGCTGCAT GA 

 

Protein sequence

MTNTDKQNQM ANAIRFLSMD AVEKANSGHP GLPMGAADIA TTLYTRFLSH DPKNPHWPDR 
DRFVLSAGHG SMLLYSLLYL SGYEDITIDE IKKFRQLGSR TAGHPEYGHA AGIETTTGPL 
GQGIANAVGM AISERILNAQ FGDSLVNHYT YALVGDGCLM EGISQEAIAL AGHLKLNKLI 
VLWDDNNISI DGPITLSDNT DQPARFAASG WNTMAVDGHD QDAIAKAIEL ARVSDRPTLI 
ACKTTIGFGA PNKAGTNKVH GSPLGAEEIA ATRKALGWSS EPFVVPAEVL DAWRVAGLNA 
AKKRLEWEKR LSAVEAETRA EFERRMRGEL PSGFDAAIVE YKKKLSADKP KVATRKSSEM 
ALEVINGVVP ETVGGSADLT GSNNTKTSQT KAVTPENYDG RYIHYGIREL GMAAAMNGIT 
LHGGLIPYSG TFLCFSDYAR PAMRLSSLMG IRVVYVMTHD SIGLGEDGPT HQPVEHLAAL 
RAIPNHNVFR PADAVETAEC WQLALHSRKT PSTLALTRQN LPTVRTEHRE ENLCAFGAYE 
LAAASSDAKV TIFATGSEVE IALKARDLLE GKGIATRVVS VPCFELFEQQ SDAYKEATIG 
DAPIKLAIEA AISLGWERFI GENGIFIGMK GFGASGEIND LYKHFGITAE HAVEAAEKKL 
NAA