| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1688 |
|---|
| Symbol | |
|---|
| ID | 1167381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | - |
|---|
| Start bp | 1631268 |
|---|
| End bp | 1632224 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637330627 |
|---|
| Product | sodium/bile acid transporter family protein |
|---|
| Protein accession | NP_698673 |
|---|
| Protein GI | 23502546 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.37024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTA TTGCCGCTTT TTCTGATTTT GTAGGGCGCA GTTTTGCCAT ATGGGTCATT
GTTTTTGCCG CGCTGGGCTT TGTCATGCCG GCAACATTCA GCATCTTTGC GCCCTGGATC
GTGGTTCTGC TAGGCATCAT CATGTTCGGC ATGGGCCTGA CGATTTCGGG CAAGGATTTT
GCTGAAGTTG CCAAAAGGCC GTTTGATGTC GCCATCGGTG TGCTGGCGCA GTTCATCATC
ATGCCGCTTC TTGCCGTGCT TCTGACCCGA ATCATTCCCA TGTCGCCGGA GGTCGCGGCG
GGTGTGATTC TCGTTGGCTG CTGCCCCGGC GGCACGGCCT CCAATGTCAT GACCTATCTG
TCGAAGGGCG ATGTGGCGCT CAGCGTTGCC TGCACCAGCG TTACCACGCT ACTCGCACCG
CTGGTCACGC CTTTCCTCGT CTGGTTCTTC GCCAGCCAGT ATCTGCCGGT CGATGCGATG
AGCATGTTCA TCAGCATCGT GAAGGTGATC CTCGTGCCGC TGGCGCTCGG TTTCGTTCTC
CAGAAGCTCG TGCCGGGCGT GGTCAAGGCT GCGGTGCCCA TGCTGCCGCT GGTGTCGGTG
GTCGGGATCG TGCTGATCGT CGCCGCCGTT GTTGCGGTCA ACAAGGCCGC TATCGCACAG
TCGGGCCTGC TGATCTTCGC GGTTGTCGTC CTGCATAATT GCTGCGGGTT GCTTCTTGGC
TATTTCGCGG CCCGTTTCGC GGGGCTTTCG CTTGCCAAGC GCAAGGCAAT CAGCATCGAG
GTCGGCATGC AGAACAGCGG GCTGGGGGCT GCGCTCGCCA ATGCGCATTT CTCGCCGCTT
GCCGCGGTGC CGAGCGCCGT TTTCAGCGTC TGGCACAATA TTTCCGGTGC GCTGGTCGCA
AGCTATTATG CGCGCATGGA AGATGATGCT TCCGAAACGC AGACGTCCGC GCAATAA
|
|---|
| Protein sequence | MKAIAAFSDF VGRSFAIWVI VFAALGFVMP ATFSIFAPWI VVLLGIIMFG MGLTISGKDF
AEVAKRPFDV AIGVLAQFII MPLLAVLLTR IIPMSPEVAA GVILVGCCPG GTASNVMTYL
SKGDVALSVA CTSVTTLLAP LVTPFLVWFF ASQYLPVDAM SMFISIVKVI LVPLALGFVL
QKLVPGVVKA AVPMLPLVSV VGIVLIVAAV VAVNKAAIAQ SGLLIFAVVV LHNCCGLLLG
YFAARFAGLS LAKRKAISIE VGMQNSGLGA ALANAHFSPL AAVPSAVFSV WHNISGALVA
SYYARMEDDA SETQTSAQ
|
|---|
| |