| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1420 |
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| Symbol | ligA |
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| ID | 1167102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brucella suis 1330 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004310 |
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| Strand | - |
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| Start bp | 1373732 |
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| End bp | 1375891 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637330360 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | NP_698418 |
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| Protein GI | 23502291 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.801341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATA TTTCCGTCGA GAAACTGACC GAACTCGAAG CTGCCGCCGA ACTGGAACGG
CTGGCGCGCG CGATTGCTCA TCACGACGAG CTTTATCACG CCAAGGACAG GCCGGAAATT
TCCGATGCGG CTTATGATGC ACTGAAGCGG CGCAACGAGG CGATTGAAGC GCACTTTCCG
GCACTTGTCC GCGATGACAG CCCGTCGCGG CGTGTGGGTG CAGCCCCGGC GCTTGCCACC
TTTGCGCCTG TTGTTCACGC GCGGCCCATG CTGTCGCTGG ATAATGCCTT TAGTGATGAG
GACGTGCGTG ATTTTGTTGG CAGCGTCTAT CGCTTTCTGG GCCAACTGCC GGATGATTCC
ATCGCCTTTA CCGCAGAACC GAAGATCGAT GGGCTTTCCA TGTCGATCCG TTACGAGAAT
GGAATTCTGG TTAGCGGTGC GACACGCGGG GATGGCACAA CGGGCGAGAA TGTAACAGCC
AATATCCGCA CCATTGCTGA AATCCCGAAC AGGCTTCCGG CAGGTGCGCC TGCTGTCGTG
GAAGTGCGCG GCGAGGTCTA TATGGCCAAG AGCGACTTTC TGACGCTCAA TGCGCAGATG
GAGGCGGAGG GCAAGCAGAC CTATGTGAAC CCGCGCAATA CGGCAGCAGG TTCGCTGCGC
CAGCTTGATG CGAAGGTGAC GGCAAGCCGC AAGCTCAGGT TCTTCGCCTA TGCCTGGGGG
GAAATGTCGG ACATGCCTGC GGATACGCAA TTGGGCATGG TCGAGGTTTT TCGCCAATGG
GGCTTTCCGG TCAATCCGCT GATGAAGCGG TTCAACAGCG TGGATGGGTT GCTTGCGCAT
TATCGCGCCA TCGGCATGGA GCGTCCCACG CTCGATTACG ATATCGACGG TGTTGTTTAC
AAGGTGGACC GGCTCGACCT GCAAACCCGG CTTGGTTTTC GCTCGCGCAG CCCGCGCTGG
GCGATTGCGC ATAAATTCCC GGCGGAACAG GCGCTCACCA TTTTGCGCGG CATCGATATT
CAGGTGGGCC GCACTGGCGC GCTGACGCCG GTGGCGCGGC TGGAGCCAAT CACCGTCGGC
GGTGTGGTTG TGACCAACGC GACGCTGCAC AATGAGGACT ATATCAAGGG CATAGGTCAG
AAGGGCGAGC CGATCCGGGA GGGGCGCGAT ATCCGCATTG GCGATAGCGT GATCGTGCAG
CGCGCGGGCG ATGTCATCCC GCAGATCGTG GATGTGGTGC TTGAGGAAGG CAAAAAACGC
GGCGAGCCTT ATCAGTTTCC CCATGTCTGC CCCGCCTGCG GCAGCCATGC CGTGCGCGAG
GAGGGCGAGG CGGTACGCCG CTGCACCGGC GGGCTGATCT GCCCTGCGCA GGCGGTGGAA
CGCATCCGCC ATTTTGTGTC GCGCAATGCC TTCGACATTG AGGGGCTTGG CGAAAAGCAG
GTCGAGTTCT TCTTCAATGC GGAAGATCCG GCCCTTTGCA TCCGCTCGCC TGCCGATATT
TTCACACTGA AAAAGCGGCA GGAAAACTCG CTGACCAAGC TTCAGAATAT CGAAGGCTTT
GGCGCAACTT CCGTGAAGAA GCTTTATGAC GCCATCGATG CGCGGCGCGA GATTGCACTC
CACCGCTTTC TGTTTGGTCT TGGCATCCGC CATGTGGGCG AGGTGAATGC CAAGCGCCTT
GCCCGCGCCT ATCTTTCATA TGCCGCTTTT GAGAAGGCGG CGCTGGAGGC TGTGCCGCCA
AAAGAAGGCG ACCGCACCGA CAAGGGCAGC GAAGCGTGGC AGGACATGCT GGCCGTGGAG
GGGATCGGTT CCATCGTGGC GGAAGCCGTG GTCGATTTTT ATGGCGAGCC GCATAACCGC
GAAGTGCTGG CCGCACTTCT TGCCGAAGTA ACGCCGCTTG ATGAGGAAGC GCGTGTGGCG
ACCGGTTCGC CCGTCGAGGG CAAGACGGTG GTTTTCACCG GCAGTCTGGA GCGCATGTCA
CGCGATGAAG CGAAGGCTAT GGCTGAGCGC CATGGCGCGA AGACGGCAGG CTCTGTCTCC
AAGAAGACCG ATCTCGTGGT GGCAGGGCCG GGGGCCGGTT CCAAGCTTGC CAAGGCGACG
GAACTGGGCA TTGAGGTTAT CAATGAAGAC GACTGGTTCA AGCTTGTTGG GGAGGATTGA
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| Protein sequence | MSDISVEKLT ELEAAAELER LARAIAHHDE LYHAKDRPEI SDAAYDALKR RNEAIEAHFP
ALVRDDSPSR RVGAAPALAT FAPVVHARPM LSLDNAFSDE DVRDFVGSVY RFLGQLPDDS
IAFTAEPKID GLSMSIRYEN GILVSGATRG DGTTGENVTA NIRTIAEIPN RLPAGAPAVV
EVRGEVYMAK SDFLTLNAQM EAEGKQTYVN PRNTAAGSLR QLDAKVTASR KLRFFAYAWG
EMSDMPADTQ LGMVEVFRQW GFPVNPLMKR FNSVDGLLAH YRAIGMERPT LDYDIDGVVY
KVDRLDLQTR LGFRSRSPRW AIAHKFPAEQ ALTILRGIDI QVGRTGALTP VARLEPITVG
GVVVTNATLH NEDYIKGIGQ KGEPIREGRD IRIGDSVIVQ RAGDVIPQIV DVVLEEGKKR
GEPYQFPHVC PACGSHAVRE EGEAVRRCTG GLICPAQAVE RIRHFVSRNA FDIEGLGEKQ
VEFFFNAEDP ALCIRSPADI FTLKKRQENS LTKLQNIEGF GATSVKKLYD AIDARREIAL
HRFLFGLGIR HVGEVNAKRL ARAYLSYAAF EKAALEAVPP KEGDRTDKGS EAWQDMLAVE
GIGSIVAEAV VDFYGEPHNR EVLAALLAEV TPLDEEARVA TGSPVEGKTV VFTGSLERMS
RDEAKAMAER HGAKTAGSVS KKTDLVVAGP GAGSKLAKAT ELGIEVINED DWFKLVGED
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